New Open Pipeline Speeds the Hunt for Unknown Viruses in Sequencing Data
Scientists have developed LazypipeX, a customizable and sensitive bioinformatics pipeline that accelerates the discovery of known and novel viruses from ...
Tag: metagenomics
Forest Soil Antibiotic Resistance Genes Prove Stubbornly Stable When Leaf Litter Is Removed
A metagenomic study of Chinese forest soils finds that removing leaf litter changes soil nutrients but leaves antibiotic resistance genes ...
DartUniFrac Brings Megascale Computing to Microbiome Diversity Analysis
A new high-performance tool called DartUniFrac enables phylogenetic microbiome diversity analysis at unprecedented scale, overcoming the computational limits of classical ...
New Software Sharpens the Hunt for Microbes That Devour Toxic Fuel Pollutants
Researchers at Carnegie Mellon University have developed BTEXgenie, a curated hidden Markov model-based tool that dramatically improves substrate-specific annotation of ...
Gut Microbes and Metabolites Reveal Distinct Signatures Across Chronic Liver Diseases
A multi-omics study of 80 patients reveals etiology-specific gut microbial and metabolic signatures in chronic liver disease.
Gut Microbiome Shifts Track Colorectal Cancer Stages in Landmark Multi-Omics Study
A large multi-omics study of 984 samples reveals that gut microbial diversity, metabolites, and elemental profiles shift progressively across colorectal ...
Machine Learning Reads Genome Sequences to Reveal Hidden Microbial Symbionts Across Earth’s Biomes
A machine-learning framework called symclatron uses genome content to predict which uncultivated bacteria and archaea live in close association with ...
Most of Earth’s ocean lies in the south, yet microbiome research clings to the north
A new analysis reveals that ocean microbiome sampling, authorship and technology remain concentrated in the northern hemisphere despite most of ...
New Microbiome Tool Joins Multi-Omics Data With Sixfold Accuracy Boost
Researchers have introduced Joint-RPCA, a fast and accurate computational method that jointly integrates sparse, compositional multi-omics microbiome data to reveal ...
Seasonal Shifts in Shitalakshya River Microbes and Antibiotic Resistance Revealed by Metagenomics
Bangladesh River’s Dry-Season Crisis Is Selecting for Microbes Built to Survive Pollution A river supplying drinking water to millions of ...
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Mothers who receive childcare support from maternal grandparents show more parental warmth, finds NTU Singapore study
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University of Seville Breaks 120-Year-Old Mystery, Revises a Key Einstein Concept
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Bee body mass, pathogens and local climate influence heat tolerance
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Researchers record first-ever images and data of a shark experiencing a boat strike
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Groundbreaking Clinical Trial Reveals Lubiprostone Enhances Kidney Function
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