Tag: amplicon sequencing

A 32-day factorial field trial in a Chinese greenhouse found that plastic-film mulching reduced bacterial richness and diversity while raising ...

Taxonova, a deep learning classifier, achieved high species-level accuracy across short- and long-read ribosomal amplicons in benchmark tests.

A field study of Acaena macrocephala seeds at three elevations in southern Chile found elevation-associated differences in bacterial and fungal ...

An eight-patient case series found that nanopore amplicon sequencing identified fungi or bacteria in culture-negative infections, with targeted treatment followed ...

Amplicon sequencing expanded the known diversity of cystobasidiomycete yeasts associated with Arthoniales lichens while finding no general link between yeast ...

A Pearl River Estuary field study detected 28 targeted aquatic invasive species with environmental-DNA multiplex PCR sequencing, while showing that ...

A comparative study across 21 European lakes found that amplicon, metagenomic and metatranscriptomic sequencing methods systematically differ in how they ...

Natrix2 adds dedicated Oxford Nanopore processing, alternative clustering and taxonomic tools, and specialist reference databases to an open-source metabarcoding workflow.

A new open-source tool called ampliconaudit detects silent failures in amplicon taxonomic pipelines by auditing post-hoc artifacts, ensuring that computational ...

Two strains of the beneficial fungus Trichoderma harzianum reduced red pepper Phytophthora blight incidence by 90.9 percent while promoting plant ...