Tag: pangenome

A survey of 21 tea accessions identified 242 OSCA genes, while Arabidopsis overexpression experiments associated tea CsOSCA1.1 with enhanced osmotic ...

The Emirati pangenome combines chromosome-scale assemblies with a population-specific graph that captures regional variation and supports structural-variant inference in an ...

Genomic analysis of three Streptococcus sinensis isolates from a patient with infective endocarditis reveals a conserved cyl-like gene block and ...

Researchers have developed GraTools, an open-source command-line tool that simplifies and accelerates the exploration and manipulation of pangenome variation graphs, ...

A comprehensive analysis of 2,737 genomes reorganizes the Mycobacterium avium complex into fifteen species-level clusters and delivers an open-access identification ...

A streamlined graph-based tomato pangenome built from cultivated and wild parents has uncovered a new fruit-weight gene and a regulator ...

A new review in Stress Biology details how quinoa's extraordinary salt, drought, and cold tolerance, now backed by reference genomes, ...

Whole-genome sequencing of multidrug-resistant E. coli from Bangladeshi poultry farms reveals dense resistance arsenals and genetic ties to globally distributed ...

The new SVPG method uses pangenome graphs to detect structural variants accurately from long-read sequencing data while rapidly incorporating new ...

A new pangenome study of grasshopper mice reveals Onychomys-specific sodium channel mutations, a vitamin B12 absorption gene duplication and toxin-induced ...