Study Benchmarks Eight Antibody Language Models for Design Tasks
A new study in Genome Biology benchmarks eight antibody language models across five design tasks, finding that AbLang, AntiBERTa2, and ...
Tag: Genome Biology
Dodecaploid Desert Shrub Genome Reveals Polyploidy-Driven Arid Adaptation
A telomere-to-telomere genome assembly of the dodecaploid desert shrub Prunus pedunculata reveals an autopolyploid origin and duplicated genes repurposed for ...
New Graph Pangenome Pipeline Simplifies Plant Organelle Genome Analysis
A new pipeline called MineGraph streamlines graph pangenome analysis of plant plastid and mitochondrial genomes, with an application to 709 ...
New CSDE method corrects preprocessing bias in spatial transcriptomics
A new method called CSDE uses a small set of expert-validated cells to correct systematic preprocessing errors in spatial transcriptomics ...
Glutamine-aspartate tradeoff shapes cancer cell growth and flexibility
A systematic study of 54 cancer cell lines reveals a tissue-linked tradeoff between using glutamine or aspartate for glutamate synthesis, ...
ReadsRatio method traces tissue origins of cell-free DNA across sequencing platforms
A new method called ReadsRatio estimates tissue contributions to circulating cell-free DNA from unmethylated read ratios in cell type-specific marker ...
AlphaGenome Atlas Predicts Effects of Billions of DNA Changes
AlphaGenome Atlas provides AI-generated predictions for more than 9 billion possible single-letter DNA changes across hundreds of human cell types ...
New Algorithm Tidies the Chaos of Genomic Motif Data
Every cell in the human body contains the same genome, yet a skin cell, a neuron, and an immune cell ...
Molecular Time Machine Records How Human Stem Cells Build the Embryonic Gut
Every cell in the human body carries a hidden archive of its past. Now researchers at Erasmus University Medical Center ...
New Benchmark Reveals the Best Pipelines for Finding Structural Variants in Plant Genomes
Structural variants—large-scale rearrangements of DNA such as deletions, insertions, duplications, inversions, and translocations—are among the most consequential sources of genetic ...
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Mothers who receive childcare support from maternal grandparents show more parental warmth, finds NTU Singapore study
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University of Seville Breaks 120-Year-Old Mystery, Revises a Key Einstein Concept
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Bee body mass, pathogens and local climate influence heat tolerance
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Researchers record first-ever images and data of a shark experiencing a boat strike
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Groundbreaking Clinical Trial Reveals Lubiprostone Enhances Kidney Function
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