New Shell-Script Pipeline Speeds Detection of AMR Genes in Metagenomes
Researchers have developed MetaAMRSpotter, an open-source shell-scripted pipeline that chains nine bioinformatics tools to detect pathogens and antimicrobial resistance genes ...
Tag: bioinformatics pipeline
New Open-Source Pipeline Speeds Up Whole Exome Sequencing Analysis
An open-source pipeline called WEAP automates whole-exome sequencing analysis from raw reads to annotated variants, running key steps up to ...
eDNA Metabarcoding Gets a Tuning Kit: New Study Standardizes How We Read the Ocean’s Genetic Fingerprints
A new study compares extraction protocols and polymerase enzymes for marine vertebrate eDNA metabarcoding and introduces the open-source MVeM bioinformatics ...
ERMA brings standardization to single-cell epicPCR analysis of microbial communities
An open-source Snakemake pipeline called ERMA standardizes and automates epicPCR data analysis, achieving strong concordance with published results and full ...
New Automated Pipeline Speeds Up Gene Hunting in Crop Breeding
Researchers have developed BSArray, an automated R Shiny pipeline that turns Illumina SNP array data into mapped quantitative trait loci, ...
New Open Pipeline Speeds the Hunt for Unknown Viruses in Sequencing Data
Scientists have developed LazypipeX, a customizable and sensitive bioinformatics pipeline that accelerates the discovery of known and novel viruses from ...
Revolutionary Software Tool Enhances Insights into Trait Evolution
In recent years, the complexities surrounding the study of evolution have posed significant challenges for researchers seeking to elucidate how ...
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Mothers who receive childcare support from maternal grandparents show more parental warmth, finds NTU Singapore study
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University of Seville Breaks 120-Year-Old Mystery, Revises a Key Einstein Concept
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Bee body mass, pathogens and local climate influence heat tolerance
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Researchers record first-ever images and data of a shark experiencing a boat strike
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Groundbreaking Clinical Trial Reveals Lubiprostone Enhances Kidney Function
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