Tag: comparative genomics

A Kyoto University team has developed Species-OT, a computational method that compares the geometric shapes formed by gene expression patterns ...

A full genome sequence of Acinetobacter lwoffii DJPGP01, isolated from rice rhizosphere soil in India, reveals genes for phosphate solubilisation, ...

A genome-wide survey of 21 Oryza species uncovers three polyphenol oxidase gene types shaped by tandem duplication, frequent truncation, and ...

A computational survey of 381 oral bacterial genomes found 48,234 G-quadruplex motifs, with a 2.5 to 3-fold enrichment in promoter ...

A population-scale genomic survey of 1,678 Staphylococcus aureus genomes finds intact prophages frequently carry virulence genes but rarely antimicrobial resistance ...

Researchers have derived closed-form, alignment-free estimators that jointly quantify substitution, deletion and insertion rates from k-mer statistics, with concentration guarantees ...

Genomic analysis of seven Tenacibaculum maritimum isolates from farmed salmon, halibut, and lumpfish in Canada and Norway reveals conserved secretion ...

Researchers assembled the first complete chloroplast genome of the Afghan-Pakistani herb Nepeta griffithii and compared it with nine relatives, revealing ...

A comparative genomic study maps the seed dormancy genes shared between the model grass Brachypodium distachyon and temperate cereal crops ...

A comparative genomic study finds that strong selection on maternally inherited egg colour mimicry in cuckoo finches accelerates W chromosome ...