In an unprecedented and long-term ecological research effort spanning nearly three decades, scientists have unveiled remarkable transformations occurring in high-elevation mountain meadows due to sustained climate warming. This study, led by University of Oklahoma’s Lara Souza and published in the prestigious journal Proceedings of the National Academy of Sciences, reveals not only the conspicuous above-ground conversion of diverse plant communities but also intricate and profound alterations within the underground microbiome, particularly fungal and microbial communities integral to soil health and ecosystem functioning. This research underscores the interconnectedness between climate change, vegetation dynamics, and soil microbiology, painting a comprehensive picture of ecosystem responses to warming that were previously unforeseen.
The field warming experiment, situated at the Rocky Mountain Biological Laboratory in Colorado, utilized experimental heaters to simulate increased temperatures year-round over an extensive 29-year period. This prolonged warming led to a marked ecological transition known as “shrubification,” where the once-thriving grassy meadows, dominated by species such as fescue and sunflowers, gradually gave way to shrub-dominated landscapes primarily characterized by sagebrush. The gradual replacement of herbaceous plants by shrubs constitutes a fundamental shift in ecosystem structure and function, altering both the spatial and temporal availability of resources like light, water, and nutrients.
What distinguishes this research is the thorough exploration of subterranean community responses alongside aboveground vegetation changes. Research teams led by Souza and her colleagues Stephanie Kivlin, Aimée Classen, and Jennifer Rudgers extended their analysis beyond surface soil layers to investigate microbial and fungal populations at greater depths in 2019. This deep soil sampling revealed that the warming-driven shift in plant communities corresponded with significant restructuring of root-associated fungal assemblages, indicating a decoupling of historical plant-fungal symbiotic relationships. The data demonstrated a pronounced decline in mycorrhizal fungi, which traditionally form mutualistic partnerships with plants to facilitate water and nutrient uptake in exchange for carbon, while saprotrophic fungi, responsible for breaking down organic matter, showed increased prevalence in warmed soils.
This observed decline in mycorrhizal fungi under sustained warming challenges previous assumptions that symbiotic fungi might adapt or acclimate to heightened temperatures over time. Instead, the disruption of these crucial mutualisms signals a transformative change in belowground ecological interactions, with profound implications for nutrient cycling and carbon sequestration. The diminished presence of mycorrhizal fungi suggests that plants in these warming meadows may face increased stress in acquiring essential nutrients, potentially altering plant growth strategies and ecosystem productivity.
The shift from fast nutrient cycling in herbaceous meadows to slower, conservative nutrient turnover in shrub-dominated environments illustrates a fundamental change in ecosystem functioning. Originally, grassland ecosystems promoted rapid nutrient uptake and recycling, maintaining high productivity and nutrient availability. Conversely, shrubified ecosystems exhibit more conservative resource use, reducing nutrient turnover rates and potentially increasing soil dryness and aridity. This shift can cascade through trophic levels, impacting herbivores and other wildlife dependent on the quality and quantity of forage available in these habitats.
Moreover, this research exemplifies the “coupling” and “decoupling” of aboveground and belowground processes in response to climate perturbations. While plant communities exhibited clear changes in species composition and structure, their associated fungal symbionts responded differentially. The observed decoupling signifies that aboveground vegetation shifts may no longer predict belowground microbial dynamics, complicating efforts to model and forecast ecosystem responses to global change. Understanding these differential responses is critical, as symbiotic fungi play a vital role in ecosystem resilience, soil carbon storage, and nutrient cycling.
The experimental warming setup at the Rocky Mountain Biological Laboratory serves as a model system for predicting the long-term impacts of climate change on montane ecosystems globally. The persistent increase in temperature imposed by the heaters simulates realistic warming scenarios projected under anthropogenic climate trajectories. Thus, the insights gleaned from this system provide a window into potential future ecological configurations, demonstrating how sustained warming can drive transitions not only in plant community composition but also in fundamental ecosystem processes mediated by fungi and microbes.
Furthermore, the findings illuminate the fragility of mutualistic interactions under climate stress. The collapse or reduction of mycorrhizal networks may impair the ability of plants to cope with environmental changes, potentially leading to decreased productivity, altered species distributions, and diminished ecosystem services. Such ecosystem service losses—ranging from nutrient cycling efficiency to wildlife foraging habitat—highlight the broader consequences of microbial community shifts extending beyond immediate soil processes.
The collaboration among institutions—University of Oklahoma, University of Tennessee, University of Michigan, and University of New Mexico—exemplifies the interdisciplinary approach necessary to tackle complex ecological questions. By integrating plant ecology, soil microbiology, fungal biology, and climate science, the team constructed a holistic understanding of ecosystem transformations under warming conditions, bridging gaps between above and belowground biological domains.
Despite these advances, researchers emphasize the necessity for ongoing investigation to delineate the temporal dynamics and potential reversibility of these changes. Questions remain about how long it takes for complete decoupling of plant and fungal communities to occur, whether mitigation efforts could restore historic symbiotic balances, and how these belowground shifts interact with other global change factors, such as altered precipitation patterns or land use changes.
This comprehensive study acts as a bellwether for the complex feedbacks between climate change and ecosystem biology. It signals that warming-induced plant community shifts are accompanied by profound subterranean microbial reorganizations that alter nutrient dynamics and ecosystem resilience. As climate warming accelerates worldwide, the fate of such montane ecosystems may depend heavily on these microbially mediated feedbacks, which in turn influence carbon storage potential and biodiversity conservation outcomes.
In summary, this groundbreaking research reveals that experimental warming not only triggers “shrubification” in mountain meadows but also causes a critical decoupling of plant–fungal symbioses. This decoupling results in a transition toward ecosystems with slower nutrient recycling and reduced microbial diversity, which could dramatically reshape ecosystem services. These findings underscore the urgency of considering soil microbial dynamics within climate change models to better forecast ecosystem trajectories and develop adaptive management strategies.
Subject of Research: Climate change impacts on plant-fungal symbiotic interactions and ecosystem functioning in high-elevation mountain meadows.
Article Title: Experimental warming decouples plant-fungal symbiont interactions and leads to a more conservative ecosystem.
References: Proceedings of the National Academy of Sciences
Image Credits: University of Oklahoma
Keywords: Climate change effects, Mycorrhizal fungi, Fungi, Shrubs, Symbiosis, Mutualism

