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	<title>X-ray microtomography &#8211; Science</title>
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	<title>X-ray microtomography &#8211; Science</title>
	<link>https://scienmag.com</link>
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		<title>New Guideline Pairs X-ray Microtomography With Histology to Standardize Bone Defect Repair Analysis</title>
		<link>https://scienmag.com/new-guideline-pairs-x-ray-microtomography-with-histology-to-standardize-bone-defect-repair-analysis/</link>
		
		<dc:creator><![CDATA[Melissa Hughes]]></dc:creator>
		<pubDate>Sat, 17 Oct 2026 06:25:17 +0000</pubDate>
				<category><![CDATA[Science News]]></category>
		<category><![CDATA[biomaterials]]></category>
		<category><![CDATA[bone defect repair]]></category>
		<category><![CDATA[bone regeneration]]></category>
		<category><![CDATA[comparative analysis of bone healing techniques]]></category>
		<category><![CDATA[comprehensive]]></category>
		<category><![CDATA[Frontiers in Imaging]]></category>
		<category><![CDATA[guideline]]></category>
		<category><![CDATA[histological assessment of bone repair]]></category>
		<category><![CDATA[histology]]></category>
		<category><![CDATA[long bone and flat bone healing studies]]></category>
		<category><![CDATA[micro-CT]]></category>
		<category><![CDATA[micro-CT and histology]]></category>
		<category><![CDATA[microarchitecture evaluation in bone regeneration]]></category>
		<category><![CDATA[microtomography-guided]]></category>
		<category><![CDATA[regenerative biomaterials assessment]]></category>
		<category><![CDATA[reproducible bone defect protocols]]></category>
		<category><![CDATA[rodent bone defect models]]></category>
		<category><![CDATA[standardized bone defect analysis]]></category>
		<category><![CDATA[tissue engineering]]></category>
		<category><![CDATA[translational bone tissue engineering]]></category>
		<category><![CDATA[X-ray]]></category>
		<category><![CDATA[X-ray microtomography]]></category>
		<category><![CDATA[X-ray microtomography in bone healing]]></category>
		<guid isPermaLink="false">https://scienmag.com/?p=294682</guid>

					<description><![CDATA[A new Frontiers in Imaging guideline integrates micro-CT and histology into one standardized workflow for assessing bone defect repair in rat tibiae and mouse calvaria, detailing surgical protocols, imaging parameters, morphometric quantification, and semi-quantitative histological scoring.]]></description>
										<content:encoded><![CDATA[<p>Bone regeneration research has long struggled with a methodological dilemma: the techniques that best reveal the microstructure of healing bone are not the ones that best reveal its biology. A team of Brazilian researchers has now published a comprehensive methodological guideline in Frontiers in Imaging that bridges this gap, pairing X-ray microcomputed tomography (micro-CT) with classical histology in a single standardized workflow for evaluating defect repair in rodent models. By focusing on two anatomically distinct targets—the rat tibia as a long bone and the mouse calvaria as a flat bone—the protocol offers the bone repair community a reproducible framework for assessing both mineralized microarchitecture and the cellular events that drive it.</p>
<p>The clinical stakes are considerable. Bone injuries can severely affect quality of life and productivity while driving up public health spending, and advances in tissue engineering have intensified the search for regenerative strategies and biomaterials. Translational studies typically rely on rodent lesion models, most commonly created with a surgical drill coupled to a micromotor, which produces well-defined circular osteotomies. Compared with fracture models, drilled defects offer clear delimitation and standardized lesion size, yielding statistically representative and reproducible results without requiring animal immobilization—a practical advantage that underpins the entire protocol.</p>
<p>The biology of repair differs fundamentally between the two bone types, which is why the guideline treats them separately. Long bone defects heal through endochondral ossification, with cartilage callus formation visible histologically for periods up to around 14 days. Flat bones such as the calvaria lack this process entirely; repair relies on cells migrating from the dura mater and can take considerably longer, with mineralization often stalling within weeks and leaving the lesion center filled with fibrous connective tissue resembling pseudoarthrosis. Accordingly, the protocol prescribes different analysis windows: tibial repair is assessed between 3 and 7 days for the inflammatory phase, at 14 days for callus formation, and between 28 and 30 days for late remodeling, while calvarial defects are evaluated at 15, 28, and 56 days post-surgery.</p>
<p>Surgically, the team created 2.3 mm circular defects on the right and left parietal margins of 8-week-old male Swiss mice, and 2 mm defects reaching approximately 2 mm depth in the middle third of the proximal tibial epiphysis of 12-week-old male Wistar rats. Animals were anesthetized with xylazine and ketamine, the surgical field disinfected with 10% povidone-iodine, and continuous irrigation with sterile 0.9% saline maintained throughout drilling to prevent thermal damage from overheating. All animal procedures followed CONCEA guidelines with approval from the UFSJ ethics committee, and injured bones were collected after euthanasia and fixed in 10% formalin.</p>
<p>Micro-CT serves as the quantitative backbone of the workflow, and the guideline is unusually candid about the physics behind it. X-rays generated by electron deceleration at the source interact with matter through the photoelectric effect, Compton scattering, and pair production, with the photoelectric effect dominating for low-energy photons and high-atomic-number elements—making it particularly important for imaging. Image contrast arises from differential beam attenuation governed by sample density and composition, which also defines the technique&#8217;s central limitation: immature bone with coexisting tissues of differing mineralization can appear uniform, while demineralized or extremely porous samples may lack the density needed for detectable differential absorption, compromising image formation altogether.</p>
<p>Acquisition parameters are documented in full detail. Tibial samples were scanned on a Zeiss XRM-Versa 500 at 30 kV and 2 W, with 300 ms exposure per projection, 360° rotation in 0.5° increments, a 2 × 2 binned CCD camera, and a reconstructed resolution of 7 μm per voxel. Calvarial samples were imaged on a Bruker SkyScan 1174 at 50 kV and 800 μA, averaging three frames of 2,000 ms each, with 0.7° angular increments and a reconstructed resolution of 10.11 μm per voxel. The guideline walks readers through five critical pre-scan settings—alignment, spatial resolution, beam hardening filter, X-ray source energy, and exposure time—and explains practical pitfalls such as moisture-related sample shrinkage, which can be mitigated by surrounding the specimen with foam saturated in preservation fluid.</p>
<p>Reconstruction and analysis receive equally thorough treatment. Raw projections are converted into stacked slices using algorithms such as Filtered Back Projection, with software corrections for beam hardening, ring artifacts from dead detector pixels, and rotation-center misalignment caused by minor temperature fluctuations. The team then demonstrates segmentation and morphometric quantification in both open-source Fiji/ImageJ and commercial Bruker CTan software, defining the region of interest as a circular volume matching the original defect diameter so that only newly formed bone is measured. Quantification follows established guidelines for rodent bone microstructure, reporting bone volume fraction (BV/TV), trabecular thickness (Tb.Th), trabecular number (Tb.N), and trabecular separation (Tb.Sp), alongside porosity, connectivity density, and structure model index. Notably, the authors introduce a novel refinement: plotting BV/TV as a histogram as a function of depth within the region of interest, enabling quantitative assessment of the spatial homogeneity of newly formed bone rather than a single average value.</p>
<p>Mineral density is anchored to biologically meaningful units through calibration with hydroxyapatite phantoms of known concentrations—for rodent studies, densities such as 250, 500, and 750 mg/cm³ scanned under identical acquisition parameters. Plotting known phantom densities against measured gray levels establishes a linear calibration curve that converts arbitrary attenuation values into bone mineral density, allowing researchers to gauge hard callus maturation and the quality of new bone. Histological processing then proceeds on the same specimens, which were decalcified in EDTA—52 days for tibiae, only 10 days for calvaria—before paraffin embedding, 5 μm sectioning, and hematoxylin and eosin staining.</p>
<p>The histology module captures everything micro-CT cannot see. Semi-quantitative scoring from absence to exacerbated levels covers bone neoformation, bone trabeculae, fibrocartilaginous tissue, and inflammatory infiltrate in long bones, and new bone formation, fibrous connective tissue, red blood cell infiltrate, and inflammatory infiltrate in flat bones. Osteocyte organization distinguishes primary bone, where cells are numerous and disorganized, from mature bone, where concentric lamellar arrangement prevails. The protocol even details a simple quantification of osteocyte density per square micrometer using ImageJ&#8217;s multi-point tool across five random 40× fields. Neovascularization appears as red blood cells surrounded by endothelial cells, while persistent cartilage in long bones signals delayed repair.</p>
<p>The illustrative results confirm the complementarity that motivates the entire guideline. Three-dimensional micro-CT reconstructions of tibiae and calvaria enabled precise region-of-interest delimitation and objective volumetric quantification of mineralized tissue, outperforming the clarity of two-dimensional histological sections for similar structures. Yet micro-CT loses structural and cellular information about non-mineralized tissues, and histology recovered exactly those parameters—inflammatory infiltrate, new bone formation, fibrous connective tissue, and osteocyte density. Because micro-CT is non-destructive, samples can be scanned before decalcification and histological processing, and anatomical landmarks in the reconstructed volume can even help match corresponding histological sections. Longitudinal in vivo micro-CT during healing adds temporal data on mineralization, followed by high-resolution ex vivo imaging and histology after euthanasia. By standardizing this multimodal pipeline, the authors argue, the field gains reproducibility and comparability across studies—establishing the combined approach as the gold standard for robust evaluation of regenerative strategies and biomaterials in bone repair research.</p>
<p><strong>Subject of Research:</strong> A comprehensive methodological guideline pairs X-ray microtomography with histology for standardized evaluation of bone defect repair in long and flat bones.</p>
<p><strong>Article Title:</strong> Comprehensive guideline for X-ray microtomography-guided bone analysis and histology applied to the assessment of defect repair in long and flat bones</p>
<p><strong>Article References:</strong> Costa, B. H., Lopes, I. L. P., de Oliveira, M., de Resende, T. A. J., Fajardo, M. L. M., Pires, A. B. M., Moreira, A. C., Mantovani, I. F., Nagata, R., Martins, T., Nunes, E. H. M., Manhabosco, T. M., &amp; Costa de Alvarenga, E. (2026). Comprehensive guideline for X-ray microtomography-guided bone analysis and histology applied to the assessment of defect repair in long and flat bones. <em>Frontiers in Imaging, 5</em>, Article 1844310. <a href="https://doi.org/10.3389/fimag.2026.1844310" rel="noopener noreferrer">https://doi.org/10.3389/fimag.2026.1844310</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> <a href="https://doi.org/10.3389/fimag.2026.1844310" rel="noopener noreferrer">10.3389/fimag.2026.1844310</a></p>
<p><strong>Keywords:</strong> micro-CT, bone regeneration, histology, tissue engineering, biomaterials, X-ray microtomography, bone defect repair, Frontiers in Imaging, Comprehensive, guideline, X-ray, microtomography-guided</p>
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		<post-id xmlns="com-wordpress:feed-additions:1">294682</post-id>	</item>
		<item>
		<title>Trapped brine pockets in natron could preserve signs of life on Enceladus</title>
		<link>https://scienmag.com/trapped-brine-pockets-in-natron-could-preserve-signs-of-life-on-enceladus/</link>
		
		<dc:creator><![CDATA[Violet Maxwell]]></dc:creator>
		<pubDate>Fri, 09 Oct 2026 02:35:55 +0000</pubDate>
				<category><![CDATA[Earth Science]]></category>
		<category><![CDATA[astrobiological significance of natron]]></category>
		<category><![CDATA[astrobiology]]></category>
		<category><![CDATA[cryogeochemistry]]></category>
		<category><![CDATA[Diamond Light Source]]></category>
		<category><![CDATA[Enceladus]]></category>
		<category><![CDATA[Enceladus ocean chemistry preservation]]></category>
		<category><![CDATA[fluid inclusions]]></category>
		<category><![CDATA[fluid inclusions in cryogenic minerals]]></category>
		<category><![CDATA[habitability]]></category>
		<category><![CDATA[implications for future space missions]]></category>
		<category><![CDATA[liquid water on Enceladus]]></category>
		<category><![CDATA[microbial life potential in Enceladus' subsurface ocean]]></category>
		<category><![CDATA[mineral preservation of ocean conditions]]></category>
		<category><![CDATA[natron]]></category>
		<category><![CDATA[ocean world]]></category>
		<category><![CDATA[planetary science and astrobiology]]></category>
		<category><![CDATA[plume deposits]]></category>
		<category><![CDATA[Saturn moons]]></category>
		<category><![CDATA[Saturn's moon geochemistry]]></category>
		<category><![CDATA[signs of life on icy moons]]></category>
		<category><![CDATA[sodium carbonate mineral in extraterrestrial environments]]></category>
		<category><![CDATA[synchrotron]]></category>
		<category><![CDATA[trapped brine pockets in natron]]></category>
		<category><![CDATA[X-ray microtomography]]></category>
		<guid isPermaLink="false">https://scienmag.com/?p=251321</guid>

					<description><![CDATA[Laboratory experiments show that natron crystallising from Enceladus-type brines traps pockets of parent ocean fluid, making the mineral a prime target in the search for life on Saturn's icy moon.]]></description>
										<content:encoded><![CDATA[<p>Saturn&#8217;s icy moon Enceladus has long captivated planetary scientists because it appears to possess all three of the essential ingredients for life as we know it: liquid water, a source of chemical energy, and the full suite of biologically essential elements collectively known as CHNOPS. Now, a team of researchers working at Diamond Light Source, the United Kingdom&#8217;s national synchrotron facility, has added a crucial new piece to the puzzle. In a study published in Communications Earth &amp; Environment, Liam J. Perera and colleagues report the first direct observation of fluid inclusions, tiny trapped pockets of parent liquid, inside cryogenic natron, a sodium carbonate mineral that models predict forms both on the surface and within the interior of Enceladus. The discovery matters because these inclusions act as microscopic time capsules, preserving samples of the moon&#8217;s ocean chemistry in solid form, and it elevates natron from a mere curiosity of salt chemistry to a mineral of prime astrobiological importance for the next generation of missions to the Saturnian system.</p>
<p>Enceladus is a small moon, only about 500 kilometres across, yet it behaves like a geologically active world. Its south polar region is scarred by warm fractures, informally known as tiger stripes, from which enormous plumes of water vapour and icy grains erupt continuously into space. NASA&#8217;s Cassini spacecraft flew through these plumes and analysed their composition, revealing a salty ocean rich in sodium, chloride and carbonate species beneath the ice shell. That measured composition is the starting point for the new study. The researchers prepared a laboratory analogue of the Enceladus ocean, a sodium-chloride-carbonate solution whose proportions match the constraints derived from Cassini&#8217;s plume measurements, and then set out to answer a deceptively simple question: what actually happens to such a solution when it freezes at the frigid temperatures characteristic of the moon&#8217;s surface and near-surface environment?</p>
<p>The answer is far from trivial. The phase behaviour of concentrated brines at cryogenic temperatures is notoriously difficult to predict, and the authors emphasise that the phase behaviour of Enceladus-type solutions has been poorly constrained until now. When an aqueous solution freezes, it does not simply turn into ice. As pure water ice crystallises first, the remaining liquid becomes increasingly concentrated in dissolved salts, a process called brine rejection. Eventually the residual brine becomes so concentrated that salts begin to precipitate out as their own solid minerals. For a sodium carbonate-rich solution like the one modelled on Enceladus, the key precipitating mineral is natron, the hydrated sodium carbonate Na2CO3·10H2O, a compound familiar on Earth from the evaporite deposits of soda lakes and famously used by the ancient Egyptians in mummification.</p>
<p>To watch this freezing process unfold at the microscopic scale, the team turned to a powerful combination of synchrotron X-ray techniques at Diamond Light Source. Using the DIAD beamline, they performed X-ray computed microtomography, which builds three-dimensional images of the internal structure of a frozen sample, alongside X-ray diffraction, which identifies the crystal structures of the solid phases present. This dual approach allowed the researchers to see both where liquid pockets survived within the growing ice and salt matrix and exactly which minerals formed as the temperature dropped. The experiments were carried out under cryogenic conditions that replicate the extreme cold of Enceladus, where surface temperatures plunge below 75 kelvin and even the near-subsurface remains far colder than any terrestrial environment.</p>
<p>What the tomography revealed was striking. As the Enceladus-type solution froze and natron precipitated, the growing crystals trapped and preserved discrete pockets of the parent fluid, forming classic fluid inclusions within the cryogenic natron. These inclusions are familiar features to terrestrial geologists, who routinely use fluid inclusions trapped in ancient minerals to reconstruct the chemistry and temperature of fluids that flowed through rocks millions or billions of years ago. The new results demonstrate that the same preservation mechanism operates in the sodium carbonate brines of an icy moon. In other words, wherever natron forms on or within Enceladus, it should be locking away microscopic samples of the ocean from which it crystallised, providing a window into the geochemistry of the moon&#8217;s interior that would otherwise be inaccessible beneath kilometres of ice.</p>
<p>The implications for the search for life are immediate and profound. If natron traps parent fluid as it precipitates, then any organic molecules, biosignatures or other chemical traces of biological activity present in the ocean could become sequestered within these inclusions and shielded from the harsh radiation environment at the moon&#8217;s surface. On Enceladus, the ice crust is geologically active, and material from the ocean is continually cycled to the surface through the plumes and their fallout deposits. Fresh plume deposits, the snow-like layers of material that settle near the tiger stripes after being ejected from the ocean, are predicted to be rich in natron precisely because they represent recently frozen ocean water. According to the authors, direct sampling by future missions should therefore prioritise these fresh deposits, where natron is abundant and its trapped inclusions offer the best chance of capturing preserved signatures of life.</p>
<p>The timing of this work is significant for mission planning. Enceladus is a priority target for both a NASA Flagship-class mission and the European Space Agency&#8217;s L4 large-class mission, and both agencies are currently weighing instrument suites and sampling strategies for a journey to the Saturnian system. The authors argue that future missions must have the capability to identify natron at the surface, because recognising this mineral remotely or in situ would immediately flag locations where ocean-derived material and its trapped fluid inclusions are concentrated. An orbiter or lander equipped to detect natron&#8217;s distinctive spectral signature could map the freshest, most astrobiologically promising deposits before any sample acquisition takes place, dramatically improving the scientific return of an enormously expensive and technically demanding mission.</p>
<p>The study also fills a more fundamental gap in cryogeochemistry, the discipline that the authors identify as the essential lens through which future missions must understand Enceladus&#8217;s habitability. Because the moon&#8217;s ice crust is geologically active, ocean material is not static; it freezes, deforms, fractures and is re-erupted, and every stage of that cycle is governed by the phase behaviour of its brines. Laboratory experiments like this one, which combine real-time imaging with crystallographic identification at synchrotron resolution, provide the ground truth that modellers and mission designers need. Knowing that natron precipitation traps fluid inclusions means that models of the ice shell can now account for pockets of concentrated brine preserved within salt layers, which could influence mechanical properties, thermal evolution and even the delivery of organics to the surface.</p>
<p>There is a satisfying symmetry in the fact that natron, a mineral entwined with humanity&#8217;s earliest attempts to preserve biological material, may now hold the key to detecting biology on another world. The Egyptian embalmers of three thousand years ago prized natron for its ability to desiccate and preserve; the astrobiologists of today value it for its ability to encapsulate and protect. On Enceladus, where the ocean is completely hidden from direct view, the plumes offer the only free samples, and the deposits they leave behind are the only accessible archive of ocean chemistry. The demonstration that this archive actively traps and preserves its parent fluid transforms the way scientists should think about where to look and what to collect.</p>
<p>As mission concepts mature over the coming years, the message from Diamond Light Source is clear: the humble sodium carbonate hydrate that crusts the shores of soda lakes on Earth deserves a central place in the strategy for exploring Enceladus. Mapping natron, sampling fresh plume fallout and reading the microscopic fluid inclusions within it could allow scientists to taste the moon&#8217;s ocean without drilling through its ice shell, and perhaps, if biology has ever taken hold in that dark, distant sea, to find its fingerprints sealed inside a mineral that has been quietly keeping the secret all along.</p>
<p><strong>Subject of Research:</strong> Fluid inclusions in cryogenic natron formed from Enceladus-type brines and their astrobiological significance</p>
<p><strong>Article Title:</strong> Fluid inclusions establish natron as a key astrobiological target on Enceladus</p>
<p><strong>Article References:</strong> Perera, L. J., Le Houx, J., Leonardi, A., Day, S. J., &amp; Thompson, S. P. (2026). Fluid inclusions establish natron as a key astrobiological target on Enceladus. <em>Communications Earth &amp;amp; Environment</em>. <a href="https://doi.org/10.1038/s43247-026-04080-z" rel="noopener noreferrer">https://doi.org/10.1038/s43247-026-04080-z</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> <a href="https://doi.org/10.1038/s43247-026-04080-z" rel="noopener noreferrer">10.1038/s43247-026-04080-z</a></p>
<p><strong>Keywords:</strong> Enceladus, natron, fluid inclusions, astrobiology, cryogeochemistry, synchrotron, X-ray microtomography, Saturn moons, ocean world, plume deposits, Diamond Light Source, habitability</p>
]]></content:encoded>
					
		
		
		<post-id xmlns="com-wordpress:feed-additions:1">251321</post-id>	</item>
		<item>
		<title>Four Decades of Seeing Inside Soil: How Brazil Built a Global Tomography Powerhouse</title>
		<link>https://scienmag.com/four-decades-of-seeing-inside-soil-how-brazil-built-a-global-tomography-powerhouse/</link>
		
		<dc:creator><![CDATA[Alan Morgan]]></dc:creator>
		<pubDate>Thu, 08 Oct 2026 21:08:49 +0000</pubDate>
				<category><![CDATA[Agriculture]]></category>
		<category><![CDATA[applications of computed tomography in water movement and soil health studies]]></category>
		<category><![CDATA[bibliometric analysis of Brazil's scientific output in soil tomography]]></category>
		<category><![CDATA[bibliometrics]]></category>
		<category><![CDATA[Brazil]]></category>
		<category><![CDATA[computed tomography]]></category>
		<category><![CDATA[contributions of Brazilian scientists to global soil architecture mapping]]></category>
		<category><![CDATA[development of gamma-ray and X-ray computed tomography in soil science]]></category>
		<category><![CDATA[evolution of soil imaging technology from millimeter to micrometer resolution]]></category>
		<category><![CDATA[growth of Brazil's soil tomography research over four decades]]></category>
		<category><![CDATA[impact of Brazilian soil imaging research on sustainable agriculture]]></category>
		<category><![CDATA[methodological advancements in soil imaging techniques]]></category>
		<category><![CDATA[no-tillage]]></category>
		<category><![CDATA[Oxisols]]></category>
		<category><![CDATA[paving the way for advanced imaging of soil structure]]></category>
		<category><![CDATA[soil analysis]]></category>
		<category><![CDATA[soil physics]]></category>
		<category><![CDATA[soil pore architecture]]></category>
		<category><![CDATA[soil science]]></category>
		<category><![CDATA[sustainable agriculture]]></category>
		<category><![CDATA[sustainable development goals]]></category>
		<category><![CDATA[synchrotron radiation]]></category>
		<category><![CDATA[X-ray microtomography]]></category>
		<guid isPermaLink="false">https://scienmag.com/?p=249489</guid>

					<description><![CDATA[A new bibliometric review charts how Brazilian soil computed tomography evolved from homemade gamma-ray scanners in 1985 to synchrotron imaging today, revealing a mature, internationally connected research field with outsized impact on tropical agriculture and climate science.]]></description>
										<content:encoded><![CDATA[<p>When Brazilian researchers published the first study using computed tomography to peer inside soil in 1985, they were working with first-generation scanners that took agonizingly long to acquire a single image and resolved features only at the millimeter scale. Four decades later, a sweeping bibliometric review of the country&#8217;s scientific output reveals a research field that has grown from a handful of pioneering experiments into a mature, internationally connected discipline capable of mapping the hidden architecture of tropical soils at the micrometer scale. The review, published in Discover Soil by José V. Gaspareto and Luiz F. Pires of the State University of Ponta Grossa, traces the methodological evolution of gamma-ray and X-ray computed tomography in Brazilian soil science from 1985 to 2025 and delivers a striking verdict: the field has reached a relatively mature stage, with sustained growth, increasing methodological diversity, and expanding contributions to sustainable agriculture, water management, and climate science.</p>
<p>The story begins with a landmark paper by researchers at the Brazilian Agricultural Research Corporation, EMBRAPA, who used computed tomographic scanning to conduct static and dynamic three-dimensional studies of water in soil. That 1985 study, which has since accumulated 100 citations, marked the first application of the technique in Brazil and established a temporal benchmark against which all subsequent work can be measured. In those early decades, most Brazilian studies relied on non-commercial scanners built in-house, because acquiring radioactive sources for gamma-ray tomography was considerably cheaper than purchasing X-ray systems. First-generation equipment meant long acquisition times and millimeter-scale resolution, and between 1987 and 1993 only a single article using the technique appeared in journals indexed in the Web of Science. Much of the early output circulated in Portuguese-language bulletins, conference proceedings, and regional journals that remained largely invisible to the international community.</p>
<p>The turning point came in the early 2000s, when the number of indexed publications began a steady climb. The review identified a strong linear correlation between time and publication volume, with a correlation coefficient of 0.81, and several recent years produced ten or more articles apiece. The year 2025 set the record with thirteen publications, a signal that the field is currently undergoing rapid expansion. Over the full forty-year period, the 134 articles selected for detailed analysis accumulated 2,596 citations, averaging roughly nineteen citations per article. Citation peaks in 2005, 2011, 2017, and 2019 trace the growing influence of Brazilian work, with the late-2010s surge reflecting an accelerated rate of knowledge adoption and a larger, more active research network than in any previous era.</p>
<p>To build this picture, the authors searched the Web of Science Core Collection using keywords combining tomography, soil, and Brazil, retrieving 265 raw records. After removing one record with a date discrepancy and applying a rigorous two-stage screening process, they retained 134 studies for comprehensive analysis. The screening excluded work relying on other imaging techniques such as electrical resistivity tomography or nuclear magnetic resonance, studies focused on rocks, sediments, or construction materials, and papers lacking sufficient technical detail on tomography workflows. The methodological care extended to open-access classification: automated metadata were manually verified against publisher websites to confirm license structures, guarding against temporal shifts in journal policies. The result is one of the most transparent accounts of a national research field&#8217;s development available in the soil science literature.</p>
<p>The quality indicators that emerged from the analysis are remarkable for a field built largely on public funding from a middle-income country. Of the fifty unique journals represented, sixty percent fall into the first or second quartile of the Journal Citation Reports, and the same proportion holds when measured by total article volume. Elsevier published the majority of the articles, fifty-seven of the 134, and Elsevier journals also captured sixty-three percent of all citations. Soil and Tillage Research led all venues with nineteen percent of publications, followed by Applied Radiation and Isotopes, Revista Brasileira de Ciência do Solo, Geoderma, Agriculture-Basel, and the International Journal of Geomechanics. Access models were nearly evenly split: among the 107 articles with verified access metadata, fifty-one percent appeared under open-access licenses of various colors, while forty-nine percent remained subscription-based, a balance the authors interpret as a transitional phase in scientific publishing.</p>
<p>Behind these numbers lies a distinctive institutional and financial structure. Public universities and agricultural research organizations produced the vast majority of the work, and two federal agencies anchored the funding landscape: the National Council for Scientific and Technological Development, CNPQ, provided thirty percent of reported funding, while CAPES, which supports graduate scholarships and negotiates national journal-access agreements, contributed twenty percent. State foundations such as FAPESP, the research company EMBRAPA, and international partners including the United Kingdom&#8217;s BBSRC filled out a multi-level funding architecture. Notably, ninety-six percent of the articles were published in English, underscoring a deliberate orientation toward international visibility, though the authors caution that the scarcity of Portuguese-language publications may limit accessibility for local stakeholders such as farmers and regional policymakers.</p>
<p>International collaboration emerged as a defining feature of the field&#8217;s most influential work. While seventy-six percent of articles were authored solely by Brazilian researchers, co-authorship with scientists in Canada, the United States, the United Kingdom, China, Italy, and Germany appeared disproportionately among the most-cited papers. A co-authorship network analysis built with VOSviewer revealed a highly interconnected structure organized into distinct clusters: a historical pioneering cluster anchored by early developers such as Crestana, Cruvinel, and Cesareo, and central consolidation hubs involving researchers like Pires, Cássaro, Cooper, and Reichardt, alongside international collaborators including Mooney, Ghanbarian, and Heck. The network reflects decades of academic mentorship, researcher exchange, and multi-institutional partnership, and it documents the emergence of a new generation of Brazilian soil scientists carrying the technique forward.</p>
<p>Perhaps the most consequential applications of the technology concern Brazil&#8217;s vast Oxisols, the highly weathered tropical soils that cover roughly forty percent of the country&#8217;s agricultural land. Landmark studies quantified how long-term no-tillage systems preserve functional macropore continuity compared with intensive tillage. One influential analysis showed that no-tillage maintains a tri-modal pore size distribution across surface and subsurface layers, driven by complex pore shapes and enhanced connectivity, whereas intensively tilled soil was dominated by isolated, round-shaped pores. A complementary long-term trial found that no-tillage yielded macroporosity of 19.7 percent with superior pore-network connectivity and lower tortuosity, against 14.3 percent under intensive tillage, with a single continuous complex pore network accounting for ninety-seven percent of total macroporosity. These three-dimensional metrics carry direct implications for water infiltration, root growth, and the resilience of tropical agriculture under increasingly extreme moisture events.</p>
<p>The review also mapped the field&#8217;s alignment with the United Nations Sustainable Development Goals, using Clarivate&#8217;s automated classification scheme. Across 278 SDG occurrences in the corpus, climate action dominated with thirty-two percent, followed by zero hunger at twenty-three percent, life below water at twenty-two percent, and life on land at twenty-one percent. The strong showing of aquatic ecosystem goals reflects how soil processes such as nutrient leaching and sediment transport propagate downstream. The disciplinary spread is equally telling: agriculture leads with seventy-four articles, but physics, engineering, computer science, and chemistry all contribute substantially, and recent work increasingly integrates machine learning and deep learning for pore segmentation, neural-network-based contour identification, and synchrotron-based imaging of phosphorus transport and soil structural change.</p>
<p>Challenges remain, and the authors are candid about them. Access to high-resolution CT equipment and synchrotron facilities is still restricted to a limited number of research centers, and equipment cost, maintenance demands, and the need for specialized image-processing expertise continue to bottleneck broader adoption. The dedicated CT beamline at Brazil&#8217;s Sirius synchrotron light source, focused on agronomic studies, represents a major step toward democratizing access. Looking ahead, the review calls for standardized image acquisition and segmentation protocols, open databases of raw CT images and metadata to enable benchmarking and artificial intelligence applications, and deeper integration of tomography with process-based modeling. If those recommendations take hold, the next chapter of Brazilian soil tomography may prove even more transformative than the first four decades, positioning the country&#8217;s researchers at the forefront of global efforts to understand, protect, and sustainably manage the ground beneath our feet.</p>
<p><strong>Subject of Research:</strong> Bibliometric review of four decades of gamma-ray and X-ray computed tomography research in Brazilian soil science</p>
<p><strong>Article Title:</strong> Methodological evolution and global scientific impact of Brazilian soil computed tomography research</p>
<p><strong>Article References:</strong> Gaspareto, J. V., &amp; Pires, L. F. (2026). Methodological evolution and global scientific impact of Brazilian soil computed tomography research. <em>Discover Soil, 3</em>(1), Article 183. <a href="https://doi.org/10.1007/s44378-026-00340-8" rel="noopener noreferrer">https://doi.org/10.1007/s44378-026-00340-8</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> <a href="https://doi.org/10.1007/s44378-026-00340-8" rel="noopener noreferrer">10.1007/s44378-026-00340-8</a></p>
<p><strong>Keywords:</strong> computed tomography, soil science, X-ray microtomography, Brazil, soil pore architecture, synchrotron radiation, bibliometrics, no-tillage, Oxisols, sustainable agriculture, soil physics, sustainable development goals</p>
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		<post-id xmlns="com-wordpress:feed-additions:1">249489</post-id>	</item>
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		<title>Magma Breaks and Heals Repeatedly Before Volcanic Ash Ever Reaches the Sky</title>
		<link>https://scienmag.com/magma-breaks-and-heals-repeatedly-before-volcanic-ash-ever-reaches-the-sky/</link>
		
		<dc:creator><![CDATA[Violet Maxwell]]></dc:creator>
		<pubDate>Mon, 05 Oct 2026 04:09:38 +0000</pubDate>
				<category><![CDATA[Earth Science]]></category>
		<category><![CDATA[ash fall health and environmental effects]]></category>
		<category><![CDATA[ash fall impact]]></category>
		<category><![CDATA[basaltic eruptions]]></category>
		<category><![CDATA[Cumbre Vieja]]></category>
		<category><![CDATA[eruption modeling]]></category>
		<category><![CDATA[eruption prediction challenges]]></category>
		<category><![CDATA[Geology journal]]></category>
		<category><![CDATA[infrastructure disruption from eruptions]]></category>
		<category><![CDATA[magma fragmentation]]></category>
		<category><![CDATA[Mount Etna]]></category>
		<category><![CDATA[Mount Etna eruption]]></category>
		<category><![CDATA[pyroclast dispersal]]></category>
		<category><![CDATA[pyroclast particle size]]></category>
		<category><![CDATA[pyroclasts]]></category>
		<category><![CDATA[scanning electron microscopy]]></category>
		<category><![CDATA[Stromboli]]></category>
		<category><![CDATA[volcanic ash]]></category>
		<category><![CDATA[volcanic ash hazards]]></category>
		<category><![CDATA[volcanic ash transportation]]></category>
		<category><![CDATA[volcanic eruption study]]></category>
		<category><![CDATA[Volcanic eruptions]]></category>
		<category><![CDATA[volcanology]]></category>
		<category><![CDATA[X-ray microtomography]]></category>
		<guid isPermaLink="false">https://scienmag.com/?p=236762</guid>

					<description><![CDATA[Microscopic textures in volcanic particles from Etna, Stromboli, and Cumbre Vieja reveal that magma fragmentation is a prolonged, multi-stage process of breaking and healing that shapes ash hazards.]]></description>
										<content:encoded><![CDATA[<p>Explosive volcanic eruptions are among the most disruptive natural events on the planet, and among the hardest to anticipate. When basaltic magma ascends and fragments, it launches pyroclasts—fragments of magma and rock torn from the volcano—into the atmosphere and across surrounding landscapes. The consequences can ripple far beyond the crater. During this summer&#8217;s eruption of Mount Etna in Italy, ash fell over the nearby city of Catania and forced the closure of its international airport for weeks, a vivid reminder that even comparatively small mafic eruptions can paralyze infrastructure, aviation, and daily life across an entire region.</p>
<p>The size of the particles an eruption produces is not a trivial detail. It is the single most important factor controlling how far pyroclasts travel, how long they remain aloft, and what hazards they pose once they land. Coarse bombs and lapilli fall close to the vent, while fine ash can drift for hundreds or thousands of kilometers, fouling jet engines, coating crops, and settling into water supplies. Yet despite decades of study, volcanologists have lacked a complete picture of exactly how and where these particles form inside and around an erupting volcano. A new study published in Geology, led by Jacopo Taddeucci, a volcanologist at Italy&#8217;s Istituto Nazionale di Geofisica e Vulcanologia, now offers the most detailed microtextural evidence yet that the answer is far more complicated than simplified eruption models have assumed.</p>
<p>The stakes are easy to underestimate. As Taddeucci explains, volcanic ash and larger pyroclasts interfere with nearly every aspect of life downwind of an eruption. They disrupt air traffic and road traffic, and once the eruption is over the work has only begun: the material must be removed, and its effects on crops, plants, vegetation in general, and wildlife must be assessed. Understanding how these particles are formed, he argues, is essential precisely because the formation process controls their features—their size, shape, density, and ultimately their behavior in the atmosphere and on the ground.</p>
<p>To interrogate that process, the research team turned to techniques more often associated with materials science than with volcanology. Using scanning electron microscopy and X-ray microtomography, they analyzed pyroclasts collected from three mafic, or basaltic, volcanoes: Etna and Stromboli in Italy, and Cumbre Vieja in Spain. These instruments allowed the researchers to peer inside individual particles at microscopic scales, resolving features far too small to see with the naked eye but large enough to record the physical history of the magma that produced them. Scanning electron microscopy reveals surface textures and fine-scale fractures, while X-ray microtomography builds three-dimensional images of a particle&#8217;s interior without cutting it open, preserving the spatial relationships between crystals, voids, and welded fragments.</p>
<p>What the team found inside these particles was a record of violence and repair. By identifying and quantifying characteristic microtextures—including broken crystals, sutures, and incorporated clasts—the researchers demonstrated that fragmentation does not occur at a single depth and a single moment, as many simplified eruption models assume. Instead, the process is protracted, unfolding across several distinct stages. As Taddeucci puts it, this is not a process occurring at a single point in space and time; it covers a span of time and a span of spaces that reaches from inside the volcano to outside it. The particles that rain down on cities like Catania are, in effect, archives of a prolonged sequence of breaking and healing events that began deep within the plumbing system.</p>
<p>Some of this protracted behavior had already been documented in the open air. Volcanologists have long observed bombs and lapilli breaking apart in flight, shattering into smaller fragments as they arc away from the vent. What has remained invisible is everything that happens before the magma exits the volcano, where direct observation is impossible. The new study provides the first microtextural evidence that fragmentation is also protracted inside a volcano, extending the known sequence of breaking events from the observable exterior into the hidden interior of the edifice. The microscopic scars preserved in pyroclasts—fractured crystals, sutured contacts, embedded fragments of earlier generations of magma—now serve as a proxy for processes no camera can reach.</p>
<p>Perhaps the most consequential finding concerns the opposite of breaking. The team showed that crack healing and the welding together of pyroclasts can be just as important as fragmentation in controlling the final particle size distribution. Taddeucci notes that researchers are accumulating more and more evidence that not only the breaking of the magma controls the size of the particles, but also the fact that different particles can stick together after they are broken. In other words, an eruption&#8217;s ash output is not simply the residue of how thoroughly the magma shattered; it is the net result of a dynamic competition between fracturing and reassembly. Cracks can close, and fragments that separate can fuse back together, particularly in hot, low-viscosity basaltic systems where freshly exposed surfaces remain plastic enough to weld.</p>
<p>This reframing has direct implications for hazard modeling. Particle size governs how pyroclasts are dispersed through the atmosphere, and computer models of eruptions rely on assumptions about that size distribution to forecast ash cloud trajectories, ground deposition, and aviation impacts. If fragmentation is protracted and healing is significant, then models that treat fragmentation as a single instantaneous event at a fixed depth may systematically misestimate the grain size of the erupted material—and with it, the reach of the hazard. Incorporating the full break-and-heal history into eruption models could therefore sharpen forecasts of how far ash will travel and how long airports, roads, and agricultural areas will remain affected.</p>
<p>The microtextures identified in the study are not unique to the three volcanoes examined. Asked whether the same features would appear in material from Etna&#8217;s eruption this summer, Taddeucci did not hesitate: yes, of course, he says, adding that most basaltic eruptions that are explosive in nature will produce these kinds of features. That generality is what makes the finding powerful. Rather than a quirk of one volcano or one eruption, the break-and-heal signature appears to be a common feature of explosive basaltic volcanism worldwide, from the pulsing fountains of Stromboli to the sustained activity of Cumbre Vieja on La Palma.</p>
<p>There is also a retrospective dimension to the work. Because these microtextures can be preserved in rocks from past eruptions, researchers can use them to reconstruct the fragmentation conditions of events that occurred centuries or millennia ago, extending the observational record far beyond the era of modern monitoring. Taddeucci highlights this as a significant advantage volcanology holds over other geophysical hazards: unlike earthquakes, which leave no comparable physical archive of their internal dynamics, eruptions preserve a durable record of the conditions under which their products formed. Reading that record could improve models of future eruptions at well-studied volcanoes and at sites whose behavior is known only from ancient deposits. Taddeucci also emphasizes that the research depended on collaboration, comparing eruptions across different volcanoes and countries—a scope possible only through cooperation with colleagues at observatories and institutions, including researchers beyond the paper&#8217;s official list of co-authors. As ash clouds continue to test the resilience of aviation and communities, the microscopic scars inside volcanic particles are proving to be one of the most informative records science has of what really happens when magma comes apart.</p>
<p><strong>Subject of Research:</strong> Microtextural evidence for protracted magma fragmentation and healing during basaltic explosive eruptions</p>
<p><strong>Article Title:</strong> Scientists find microscopic evidence that magma repeatedly breaks and heals during eruptions</p>
<p><strong>Article References:</strong> Scientists find microscopic evidence that magma repeatedly breaks and heals during eruptions. (n.d.). <a href="https://www.eurekalert.org/news-releases/1143902" rel="noopener noreferrer">Original publication</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> Not provided</p>
<p><strong>Keywords:</strong> volcanology, pyroclasts, magma fragmentation, Mount Etna, Stromboli, Cumbre Vieja, scanning electron microscopy, X-ray microtomography, volcanic ash, basaltic eruptions, Geology journal, eruption modeling</p>
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