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	<title>statistical methods in cancer research &#8211; Science</title>
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	<title>statistical methods in cancer research &#8211; Science</title>
	<link>https://scienmag.com</link>
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		<title>POD24&#8217;s Prognostic Power in Multiple Myeloma</title>
		<link>https://scienmag.com/pod24s-prognostic-power-in-multiple-myeloma/</link>
		
		<dc:creator><![CDATA[SCIENMAG]]></dc:creator>
		<pubDate>Mon, 27 Oct 2025 14:02:40 +0000</pubDate>
				<category><![CDATA[Cancer]]></category>
		<category><![CDATA[artificial neural networks in cancer]]></category>
		<category><![CDATA[cancer prognosis and treatment strategies]]></category>
		<category><![CDATA[clinical outcomes in multiple myeloma]]></category>
		<category><![CDATA[early disease progression impact]]></category>
		<category><![CDATA[machine learning in oncology]]></category>
		<category><![CDATA[mortality risk assessment in myeloma]]></category>
		<category><![CDATA[multiple myeloma progression]]></category>
		<category><![CDATA[POD24 prognostic significance]]></category>
		<category><![CDATA[retrospective analysis of cancer data]]></category>
		<category><![CDATA[SHAP interpretability in healthcare]]></category>
		<category><![CDATA[statistical methods in cancer research]]></category>
		<category><![CDATA[survival prediction models]]></category>
		<guid isPermaLink="false">https://scienmag.com/pod24s-prognostic-power-in-multiple-myeloma/</guid>

					<description><![CDATA[In a groundbreaking study published in the latest volume of BMC Cancer, researchers have shed new light on the prognostic implications of progression within 24 months (POD24) in multiple myeloma using both classical statistical methods and cutting-edge machine learning techniques. This comprehensive analysis not only confirms the adverse impact of early disease progression on overall [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>In a groundbreaking study published in the latest volume of BMC Cancer, researchers have shed new light on the prognostic implications of progression within 24 months (POD24) in multiple myeloma using both classical statistical methods and cutting-edge machine learning techniques. This comprehensive analysis not only confirms the adverse impact of early disease progression on overall survival but also pioneers the application of artificial neural networks (ANN) enriched by SHAP interpretability to refine mortality risk prediction models for multiple myeloma patients.</p>
<p>Multiple myeloma, a malignancy of plasma cells, has long challenged clinicians due to its heterogenous clinical course and unpredictable outcomes. POD24, defined as disease progression within two years post-diagnosis, has been widely recognized as a harbinger of poor prognosis. However, prior investigations have largely relied on traditional survival analyses without delving into the nuanced layers of patient data that machine learning can unravel. This study’s dual approach offers a robust framework to decode complex prognostic patterns that classical analyses might overlook.</p>
<p>The investigative team retrospectively assembled a dataset encompassing clinical information from 155 patients diagnosed with multiple myeloma and stratified them into POD24 and non-POD24 cohorts. Employing Kaplan-Meier survival curves and Cox proportional hazards regression models, they demonstrated a statistically significant reduction in overall survival for patients experiencing POD24, echoing earlier reports but with enhanced confidence due to a rigorous data curation and analysis pipeline.</p>
<p>Pushing beyond conventional statistics, the researchers implemented ten different machine-learning algorithms to gauge their efficacy in predicting overall survival outcomes based on the clinical variables. Among these, the Artificial Neural Network (ANN) emerged as the superior model, showcasing its ability to capture complex nonlinear relationships within the multivariate data. This finding underscores the growing utility of machine learning in oncology prognostication, where intricate biological interplay often defies linear modeling.</p>
<p>Furthering interpretability, the study harnessed Principal Component Analysis (PCA) for dimensionality reduction and visualization. PCA plots clearly delineated class separation between POD24 and non-POD24 groups, affirming that the selected features and model predictions preserved the intrinsic structure of the clinical data. This visual confirmation bolsters confidence in the machine learning model’s discriminative power and highlights the latent patterns distinguishing early progressors from their counterparts.</p>
<p>A hallmark of this research is the application of SHapley Additive exPlanations (SHAP), a game-theory-based method to demystify complex model outputs. SHAP values unequivocally identified POD24 status as the most influential predictive feature driving mortality risk in this patient cohort. This interpretable layer allows clinicians and researchers to understand the weight of POD24 relative to other clinical variables, enhancing trust in model recommendations and facilitating translational adoption.</p>
<p>The study also deployed force plots to visually encapsulate individual patient-level predictions, revealing how non-POD24 status significantly lowers predicted mortality risk. These intuitive visualizations serve as practical tools for personalized risk assessment, potentially guiding more tailored therapeutic strategies and monitoring intensities.</p>
<p>By integrating ANN-based mortality prediction with SHAP-driven interpretability, this work sets a precedent for transparent yet sophisticated prognostic modeling in hematological malignancies. It bridges the gap between black-box AI models and actionable clinical insights, a crucial step for precision medicine advancement.</p>
<p>Moreover, the evidence presented invigorates the notion that POD24 is not merely a temporal milestone but a pivotal biomarker intrinsically linked to disease aggressiveness and patient survival. Recognizing its prognostic strength through dual analytic lenses could inform future clinical trial designs, therapeutic decision-making, and patient counseling.</p>
<p>The implications extend to risk stratification, whereby patients identified as POD24 positive might benefit from intensified treatment regimens, closer surveillance, or novel therapies aimed at mitigating early relapse. As machine learning models mature and integrate larger datasets, personalized medicine in multiple myeloma could reach unprecedented accuracy levels.</p>
<p>The study&#8217;s robust methodology—combining retrospective clinical data with advanced algorithmic validation—establishes a paradigm for future research endeavors seeking to meld traditional epidemiological approaches with artificial intelligence frameworks. Such synergy promises enhanced predictive analytics capable of capturing intricacies in disease behavior.</p>
<p>Importantly, the authors emphasize the importance of model transparency, highlighting how explainable AI techniques like SHAP can unravel the decision-making process of complex neural networks. This transparency fosters clinician acceptance and sparks interdisciplinary collaboration between data scientists and healthcare providers.</p>
<p>While the cohort size of 155 patients offers valuable insights, the authors acknowledge the need for validation in larger, multicenter populations to reinforce generalizability. Additionally, integrating molecular and genomic data could further elucidate the biological underpinnings of POD24 and refine predictive accuracy.</p>
<p>This study exemplifies the transformative potential of combining statistical rigor with machine learning ingenuity in oncology research. It charts a promising path toward harnessing big data analytics for practical clinical prognostication, ultimately striving to improve outcomes in patients battling multiple myeloma.</p>
<p>As the field advances, integrating such AI-driven prognostic models into electronic health records and clinical workflows might enable real-time risk assessment, empowering clinicians to enact timely, evidence-based interventions personalized to individual patient risk profiles.</p>
<p>In conclusion, Zhang et al.’s investigation into the prognostic value of POD24 encapsulates a significant leap forward in multiple myeloma research, merging comprehensive statistical analyses with machine learning sophistication. Their findings underscore the vital role of early progression as a mortality predictor and illuminate the path for AI-enhanced oncology precision diagnostics.</p>
<hr />
<p><strong>Subject of Research</strong>: Evaluation of the prognostic significance of progression within 24 months (POD24) for overall survival in multiple myeloma, integrating traditional statistical analyses with machine learning approaches.</p>
<p><strong>Article Title</strong>: The prognostic value of POD24 for multiple myeloma: a comprehensive analysis based on traditional statistics and machine learning.</p>
<p><strong>Article References</strong>:<br />
Zhang, Q., Wang, Y., Chen, Q. et al. The prognostic value of POD24 for multiple myeloma: a comprehensive analysis based on traditional statistics and machine learning. <em>BMC Cancer</em> 25, 1652 (2025). <a href="https://doi.org/10.1186/s12885-025-15089-6">https://doi.org/10.1186/s12885-025-15089-6</a></p>
<p><strong>Image Credits</strong>: Scienmag.com</p>
<p><strong>DOI</strong>: <a href="https://doi.org/10.1186/s12885-025-15089-6">https://doi.org/10.1186/s12885-025-15089-6</a></p>
]]></content:encoded>
					
		
		
		<post-id xmlns="com-wordpress:feed-additions:1">97012</post-id>	</item>
		<item>
		<title>Golgi Signature Predicts Gastric Cancer Immunity, Prognosis</title>
		<link>https://scienmag.com/golgi-signature-predicts-gastric-cancer-immunity-prognosis/</link>
		
		<dc:creator><![CDATA[SCIENMAG]]></dc:creator>
		<pubDate>Fri, 16 May 2025 00:06:28 +0000</pubDate>
				<category><![CDATA[Medicine]]></category>
		<category><![CDATA[cancer prognosis and treatment decisions]]></category>
		<category><![CDATA[chemotherapy and gastric cancer outcomes]]></category>
		<category><![CDATA[gastric cancer immunotherapy response]]></category>
		<category><![CDATA[gastric cancer research advancements]]></category>
		<category><![CDATA[Golgi apparatus gastric cancer prognosis]]></category>
		<category><![CDATA[Golgi apparatus gene signature]]></category>
		<category><![CDATA[molecular signatures in oncology]]></category>
		<category><![CDATA[oncogenesis and Golgi function]]></category>
		<category><![CDATA[predictive biomarkers for gastric cancer]]></category>
		<category><![CDATA[prognostic risk score in cancer]]></category>
		<category><![CDATA[statistical methods in cancer research]]></category>
		<category><![CDATA[tumor microenvironment and Golgi]]></category>
		<guid isPermaLink="false">https://scienmag.com/golgi-signature-predicts-gastric-cancer-immunity-prognosis/</guid>

					<description><![CDATA[In a groundbreaking advance that deepens our understanding of gastric cancer biology, researchers have unveiled a novel prognostic signature intimately tied to the Golgi apparatus, a pivotal organelle often overshadowed in cancer research. This new Golgi apparatus-related risk score (GARS) emerges not only as a powerful predictor of gastric cancer outcomes but also as a [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>In a groundbreaking advance that deepens our understanding of gastric cancer biology, researchers have unveiled a novel prognostic signature intimately tied to the Golgi apparatus, a pivotal organelle often overshadowed in cancer research. This new Golgi apparatus-related risk score (GARS) emerges not only as a powerful predictor of gastric cancer outcomes but also as a compass guiding therapeutic decisions, from chemotherapy regimens to immunotherapy responsiveness.</p>
<p>The Golgi apparatus, traditionally recognized as the cellular logistics hub responsible for modifying, sorting, and packaging proteins and lipids, has steadily gained attention for its multifaceted role in oncogenesis. While previous investigations hinted at its involvement in tumor progression, the extent to which Golgi apparatus-associated molecular signatures impact gastric cancer development remained elusive—until now.</p>
<p>Employing robust statistical methodologies, including LASSO (least absolute shrinkage and selection operator) and multivariate Cox regression analyses, the research team meticulously curated a gene signature reflective of Golgi function. This seven-gene panel serves as the cornerstone for the GARS. Intriguingly, all these genes are significantly overexpressed in tumor tissues, underscoring their potential roles in driving malignancy or shaping the disease microenvironment.</p>
<p>Validation of GARS across patient cohorts illuminated its remarkable prognostic utility. Patients categorized into the low-risk group by GARS exhibited markedly better overall survival rates compared to their high-risk counterparts. This stratification invites a paradigm shift, enabling clinicians to tailor risk assessment strategies more precisely based on cellular organelle-linked molecular profiles rather than conventional clinicopathological features alone.</p>
<p>Beyond prognosis, GARS demonstrated predictive value in therapeutic contexts. The low-risk cohort showcased enhanced sensitivity not only to frontline chemotherapeutic agents such as 5-fluorouracil and paclitaxel but also to cutting-edge immune checkpoint inhibitors. This dual predictive capability signifies a leap forward toward personalized oncology, where treatment regimens could be optimized by harnessing the molecular characteristics of the Golgi apparatus in tumor cells.</p>
<p>Central to this gene signature is F2R (coagulation factor II receptor), a gene known for its roles in signaling pathways that govern proliferation and migration. Employing targeted gene silencing, the researchers experimentally validated that diminishing F2R expression in gastric cancer cell lines significantly curbed both cellular proliferation and migratory potential. This not only reinforces the biological relevance of F2R within the GARS framework but also highlights it as a promising therapeutic target.</p>
<p>The implications of linking Golgi apparatus features to gastric cancer extend beyond biomarker discovery. The organelle’s involvement in intracellular trafficking and post-translational modifications may influence the tumor’s immune microenvironment, affecting antigen presentation, immune evasion, and response to immunotherapies. By integrating such cellular nuances into prognostic models, this study paves the way for a more nuanced comprehension of tumor-immune interactions.</p>
<p>Moreover, the study’s findings highlight how alterations in Golgi apparatus dynamics might contribute to chemoresistance mechanisms. By correlating GARS scores with chemotherapy sensitivity, the authors suggest that aberrations in protein processing and secretion could modulate drug efficacy, offering a mechanistic foothold to develop novel sensitizing agents or combinatorial therapies.</p>
<p>This research leverages high-throughput genomic data and rigorous bioinformatics pipelines, epitomizing the fusion of computational and experimental cancer biology. The methodological approach underscores the trend of extracting organelle-centric molecular information from bulk tumor analyses, which may revolutionize biomarker development in oncology.</p>
<p>Importantly, the study transcends mere prognostic correlations by anchoring its conclusions in functional experiments. The knockdown of F2R and consequent diminished tumor cell aggression cement the causal link between Golgi apparatus-associated genes and cancer progression. This adds a compelling dimension of translational relevance, as targeting such genes could translate into tangible clinical interventions.</p>
<p>Another striking facet is the potential of GARS to serve as an indicator for immune therapy responsiveness. Given the revolutionizing impact of immunotherapies in cancer treatment, the ability to predict which patients are more likely to benefit is of immense clinical value. The Golgi apparatus’s influence on antigen processing may underlie this predictive relationship, a hypothesis that merits further investigation.</p>
<p>The study also provides an avenue for rethinking gastric cancer heterogeneity. Dissecting tumors through the prism of organelle-specific signatures offers a more granular understanding of tumor biology, which is critical given the notoriously diverse nature of gastric cancer. Stratifying patients based on GARS could refine clinical trial designs and inform personalized medicine strategies.</p>
<p>Critically, the integration of chemotherapy sensitivity data within the GARS framework serves to bridge molecular profiling and real-world therapeutic outcomes. This nexus is essential for transitioning from bench to bedside, as it allows for data-driven clinical decision-making that improves patient survival and quality of life.</p>
<p>While the research opens exciting horizons, it naturally raises questions about the mechanisms through which Golgi apparatus perturbations orchestrate tumor behavior. Future studies may delve into how these seven signature genes influence intracellular pathways, interact with other oncogenic networks, and modulate the tumor milieu, including stromal and immune cell components.</p>
<p>In summary, this study marks a pivotal milestone by positioning the Golgi apparatus—not merely as a cellular organelle—but as a critical determinant of gastric cancer fate. Through the development of GARS and experimental validation of key genes like F2R, the authors provide a compelling framework that merges cellular biology, genomics, and clinical oncology. The translational impact of these findings proposes a future wherein treatment strategies in gastric cancer are finely tuned by the intricacies of subcellular organelle biology, ultimately improving patient prognosis and therapeutic outcomes.</p>
<p>Subject of Research:<br />
The study investigates the role of Golgi apparatus-related gene signatures in predicting the prognosis, chemotherapy sensitivity, and immunotherapy response in gastric cancer.</p>
<p>Article Title:<br />
A Golgi apparatus-related signature predicts the immune microenvironment and prognosis of gastric cancer.</p>
<p>Article References:<br />
Wu, C., Sun, L., Zhu, W. et al. A Golgi apparatus-related signature predicts the immune microenvironment and prognosis of gastric cancer. Genes Immun (2025). https://doi.org/10.1038/s41435-025-00332-8</p>
<p>Image Credits: AI Generated</p>
<p>DOI: https://doi.org/10.1038/s41435-025-00332-8</p>
]]></content:encoded>
					
		
		
		<post-id xmlns="com-wordpress:feed-additions:1">45539</post-id>	</item>
		<item>
		<title>Insulin Resistance, Platelet Size Linked to Prostate Cancer</title>
		<link>https://scienmag.com/insulin-resistance-platelet-size-linked-to-prostate-cancer/</link>
		
		<dc:creator><![CDATA[SCIENMAG]]></dc:creator>
		<pubDate>Mon, 28 Apr 2025 17:32:01 +0000</pubDate>
				<category><![CDATA[Cancer]]></category>
		<category><![CDATA[advanced logistic regression in medical studies]]></category>
		<category><![CDATA[cohort study on prostate cancer]]></category>
		<category><![CDATA[cross-sectional analysis of prostate cancer]]></category>
		<category><![CDATA[implications for prostate cancer prevention strategies]]></category>
		<category><![CDATA[innovative research in cancer risk factors]]></category>
		<category><![CDATA[insulin resistance and prostate cancer risk]]></category>
		<category><![CDATA[insulin resistance indices and health outcomes]]></category>
		<category><![CDATA[mean platelet volume and cancer incidence]]></category>
		<category><![CDATA[metabolic interactions in prostate carcinogenesis]]></category>
		<category><![CDATA[non-insulin-based insulin resistance markers]]></category>
		<category><![CDATA[statistical methods in cancer research]]></category>
		<category><![CDATA[ZJU TyG TG/HDL-c METS-IR indices]]></category>
		<guid isPermaLink="false">https://scienmag.com/insulin-resistance-platelet-size-linked-to-prostate-cancer/</guid>

					<description><![CDATA[In a groundbreaking study poised to reshape our understanding of prostate cancer risk factors, researchers have unveiled compelling evidence linking non-insulin-based insulin resistance indices and mean platelet volume (MPV) to the incidence of prostate cancer. Published in the prestigious journal BMC Cancer, this cross-sectional analysis illuminates complex metabolic interactions underlying prostate carcinogenesis, an area previously [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>In a groundbreaking study poised to reshape our understanding of prostate cancer risk factors, researchers have unveiled compelling evidence linking non-insulin-based insulin resistance indices and mean platelet volume (MPV) to the incidence of prostate cancer. Published in the prestigious journal <em>BMC Cancer</em>, this cross-sectional analysis illuminates complex metabolic interactions underlying prostate carcinogenesis, an area previously shrouded in ambiguity and debate.</p>
<p>Insulin resistance has long been implicated in various metabolic disorders, but its precise relationship with prostate cancer has remained elusive. This new research, led by Wang, An, and Tao, distinguishes itself by employing innovative non-insulin-based markers to gauge insulin resistance, avoiding confounding variables inherent in direct insulin measurement. The study examines four such indices—ZJU, TyG, TG/HDL-c, and METS-IR—to assess their associations with prostate cancer risk across a substantial cohort.</p>
<p>The investigative team recruited 354 men diagnosed with prostate cancer alongside 1,498 control participants devoid of the disease. Through meticulous inverse probability weighting, they managed to balance baseline discrepancies between groups, enhancing the reliability of their findings. This statistical rigor was complemented by advanced logistic regression models, which methodically tracked the impact of increasing insulin resistance measures on prostate cancer risk.</p>
<p>Results were striking. All four non-insulin-based insulin resistance indices correlated significantly with prostate cancer presence. The TyG index, in particular, demonstrated an adjusted odds ratio exceeding five, suggesting a fivefold increase in prostate cancer risk per unit increase in this marker when other variables were controlled. These elevated odds ratios underscore a robust and possibly causal link—a remarkable advance over previous studies that reported inconclusive or conflicting data.</p>
<p>Importantly, when these indices were partitioned into quintiles, those within the highest quintile displayed risk magnitudes that were sometimes over tenfold greater than the lowest group. For instance, individuals in the highest quintile of the ZJU index had an adjusted odds ratio surpassing 15, illustrating a potent graded relationship between insulin resistance severity and prostate cancer susceptibility.</p>
<p>Visualization of these effects through restricted cubic spline analysis further confirmed the trend—prostate cancer risk rose consistently as the insulin resistance indices increased, painting a clear dose-response pattern that bolsters the argument for a mechanistic link. This pattern was observed uniformly across all four markers, reinforcing the reliability of the observations.</p>
<p>Adding another dimension to their inquiry, the researchers explored interactions between insulin resistance and mean platelet volume, a hematologic measure known to reflect platelet size and activation status. Utilizing generalized additive models, they revealed a statistically significant interaction effect: the combination of higher TG/HDL-c ratios (a surrogate of insulin resistance) and lower MPV levels amplified prostate cancer risk.</p>
<p>This finding suggests that not only do metabolic dysfunction and platelet characteristics independently influence cancer risk, but their interplay may synergistically exacerbate oncogenic processes. Considering platelets’ role in inflammation, vascular function, and tumor microenvironment modulation, these insights open new investigative avenues into how systemic metabolic conditions contribute to tumor development.</p>
<p>The robustness of the findings was further validated through three separate sensitivity analyses, which all confirmed the stability and generalizability of the associations across various model configurations. This comprehensive analytical approach dispels lingering doubts about confounding variables or statistical artifacts driving the observed relationships.</p>
<p>Beyond establishing associations, this study underscores the potential for clinical applications. Non-insulin-based insulin resistance indices are simple to calculate from routine laboratory parameters, offering a cost-effective and accessible tool for identifying men at heightened risk for prostate cancer. Combined with MPV assessments, clinicians might in the future stratify patients with metabolic syndrome components more accurately for prostate cancer screening and preventative strategies.</p>
<p>The authors caution that, as a cross-sectional investigation, causality cannot be definitively inferred. However, the compelling data invite longitudinal studies and mechanistic explorations to confirm whether insulin resistance and platelet-volume interactions actively drive prostate tumorigenesis or reflect broader systemic changes linked to cancer development.</p>
<p>This research also challenges previous paradigms that discounted the metabolic system’s influence on specific cancers, urging oncologists and endocrinologists alike to consider shared pathways. Insulin resistance affects myriad biological processes—glucose metabolism, lipid homeostasis, inflammation—that are increasingly recognized as integral to the cancer ecosystem.</p>
<p>Future research inspired by these findings could explore therapeutic modulation of insulin resistance or platelet activation as adjunct strategies in prostate cancer management. Targeting these factors might reduce not only metabolic morbidity but also oncologic risk, aligning preventative medicine with cancer control.</p>
<p>Moreover, this study adds to the growing narrative that cancers should be contextualized within systemic physiological states rather than viewed in isolation. It challenges researchers to integrate metabolic health parameters into cancer risk assessments and to reconsider the multifactorial etiology of urologic malignancies.</p>
<p>In summary, the work by Wang and colleagues marks a significant leap forward in unraveling the metabolic underpinnings of prostate cancer. By harnessing non-insulin-based indices and linking them innovatively with platelet metrics, it presents a nuanced portrait of cancer risk shaped by interconnected biological domains.</p>
<p>As the medical community digests these revelations, the hope is that improved risk stratification and earlier detection strategies will emerge, ultimately reducing prostate cancer incidence and mortality worldwide. Such progress underscores the power of interdisciplinary research bridging endocrinology, hematology, and oncology.</p>
<p>This study invests in the promise of personalized medicine, where metabolic profiles could guide screening intensity and preventive tactics in men predisposed to prostate cancer. It also sets the stage for exploring novel biomarkers that reflect complex physiological interactions rather than single isolated parameters.</p>
<p>In a time where cancer burden continues to rise globally, unraveling subtle systemic contributors offers a beacon of hope. If insulin resistance and platelet characteristics define new frontiers in cancer risk, their modulation may unlock transformative advances in public health.</p>
<p>Ultimately, this comprehensive examination offers more than data—it provides a conceptual framework inviting continued exploration of metabolism-cancer interrelations, fueling innovative clinical approaches that extend beyond traditional boundaries.</p>
<hr />
<p><strong>Subject of Research:</strong><br />
Association between non-insulin-based insulin resistance indices, mean platelet volume, and prostate cancer risk</p>
<p><strong>Article Title:</strong><br />
Association of non-insulin-based insulin resistance indices, mean platelet volume and prostate cancer: a cross-sectional study</p>
<p><strong>Article References:</strong><br />
Wang, J., An, H. &amp; Tao, N. Association of non-insulin-based insulin resistance indices, mean platelet volume and prostate cancer: a cross-sectional study. <em>BMC Cancer</em> 25, 795 (2025). <a href="https://doi.org/10.1186/s12885-025-13839-0">https://doi.org/10.1186/s12885-025-13839-0</a></p>
<p><strong>Image Credits:</strong><br />
Scienmag.com</p>
<p><strong>DOI:</strong><br />
<a href="https://doi.org/10.1186/s12885-025-13839-0">https://doi.org/10.1186/s12885-025-13839-0</a></p>
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