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	<title>mycobiome &#8211; Science</title>
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	<title>mycobiome &#8211; Science</title>
	<link>https://scienmag.com</link>
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		<title>Pine Blight Pathogen Found Mostly Where Disease Symptoms Show</title>
		<link>https://scienmag.com/pine-blight-pathogen-found-mostly-where-disease-symptoms-show/</link>
		
		<dc:creator><![CDATA[Kristina Jarvis]]></dc:creator>
		<pubDate>Mon, 19 Oct 2026 21:32:18 +0000</pubDate>
				<category><![CDATA[Biology]]></category>
		<category><![CDATA[co-occurrence networks]]></category>
		<category><![CDATA[distribution of Dothistroma septosporum in Europe]]></category>
		<category><![CDATA[Dothistroma septosporum]]></category>
		<category><![CDATA[Dothistroma septosporum molecular assay]]></category>
		<category><![CDATA[forest pathology]]></category>
		<category><![CDATA[fungal]]></category>
		<category><![CDATA[fungal communities]]></category>
		<category><![CDATA[fungal community analysis in pine needles]]></category>
		<category><![CDATA[high-throughput sequencing of pine needle fungi]]></category>
		<category><![CDATA[host range of Dothistroma]]></category>
		<category><![CDATA[impact of pine blight on timber production]]></category>
		<category><![CDATA[influence of visible symptoms on pathogen detection]]></category>
		<category><![CDATA[ITS metabarcoding]]></category>
		<category><![CDATA[mycobiome]]></category>
		<category><![CDATA[needle]]></category>
		<category><![CDATA[pine blight pathogen detection in Scots pine stands]]></category>
		<category><![CDATA[pine needle blight]]></category>
		<category><![CDATA[qPCR detection of pine fungal pathogens]]></category>
		<category><![CDATA[quantitative PCR]]></category>
		<category><![CDATA[Scots pine]]></category>
		<category><![CDATA[Slovakia]]></category>
		<category><![CDATA[symptom-based vs pathogen detection in pines]]></category>
		<category><![CDATA[variability of pathogen presence in natural pine stands]]></category>
		<guid isPermaLink="false">https://scienmag.com/?p=315439</guid>

					<description><![CDATA[A Slovak survey detected Dothistroma septosporum in only one of four natural Scots pine stands, while fungal sequencing showed that the pathogen-rich reference material had a sharply distinct community structure.]]></description>
										<content:encoded><![CDATA[<p>A species-specific molecular assay has found the pine-killing fungus Dothistroma septosporum in only one of four natural Scots pine stands examined in Slovakia, despite the pathogen’s wide distribution across Europe and its growing importance in plantation forestry. In the affected stand, at Vernár in Slovak Paradise National Park, 11 of 16 fallen-needle samples tested positive and visible symptoms of Dothistroma needle blight were present. The pathogen was not detected in the other three symptomless natural stands, challenging the idea that it routinely persists as a hidden, harmless component of native pine fungal communities.</p>
<p>Dothistroma septosporum causes reddish-brown bands, premature needle death and, in severe infections, reductions in tree growth that can translate into substantial losses for timber production. It has an unusually broad host range among pines and occurs in both hemispheres. Because the pathogen can be present before symptoms become obvious, the new study combined quantitative polymerase chain reaction, or qPCR, with high-throughput sequencing of fungal DNA. The first method provided targeted evidence for D. septosporum; the second revealed the wider community of fungi living on or colonizing Scots pine needles.</p>
<p>The researchers collected at least 50 fallen needles from each of 57 trees across the natural stands of Hrabušice, Vernár, Danišovce and Spišský Hrhov. They also assembled a comparison group of 15 archived samples from seven planted or otherwise human-altered stands in which D. septosporum had previously been confirmed. Sequencing of the fungal internal transcribed spacer region produced 1,058,455 high-quality sequences and 1,676 operational taxonomic units. These community profiles made it possible to ask not only whether the pathogen was present, but also whether its occurrence coincided with a distinct ecological neighborhood among the hundreds of fungi detected.</p>
<p>The comparison group provided the clearest signal. Every sample was positive by qPCR, and Dothistroma accounted for 27.1% of its fungal sequences. By contrast, the pathogen represented less than 1% of the sequences from the natural Vernár stand, where 11 samples tested positive, and was absent from the other natural groups. It was also absent from the visibly affected stand’s qPCR-negative samples. This distinction is important: a positive molecular result does not necessarily mean that a pathogen is abundant enough to dominate the tissue community, and detection at the stand level can conceal substantial variation among individual trees.</p>
<p>Most natural-stand fungi belonged to the class Leotiomycetes, which represented 71.0% to 84.8% of sequences, while the family Rhytismataceae accounted for 26% to 55%. Lophodermium was the most abundant genus across all locations, ranging from 17.2% to 54.8% of the community. The human-altered comparison group looked markedly different: Leotiomycetes fell to 26.0%, Dothideomycetes became the leading class at 41.2%, and Mycosphaerellaceae reached 27.2%, largely reflecting the abundance of Dothistroma. The difference was therefore not simply a loss of fungal richness in diseased material, but a marked shift in the identities and relative abundances of community members.</p>
<p>Statistical comparisons confirmed that fungal composition varied significantly among the five sample groups. A permutation multivariate analysis of variance based on Bray–Curtis dissimilarity produced an R-squared value of 0.287 and a p-value of 0.001. The greatest separation occurred between Hrabušice and the non-natural reference group, and between Danišovce and the same group. A random forest classifier also separated the groups with an overall out-of-bag error rate of 0.111. The reference group was classified without error, whereas errors occurred mainly among the natural stands. Dothistroma was the most influential classifier, but several operational taxonomic units assigned to Lophodermium and Neocatenulostroma also contributed substantially.</p>
<p>A genus-level co-occurrence network added another view of the ecosystem. It contained about 30 fungal genera connected by roughly 80 significant associations, most of them positive, with correlation coefficients ranging from 0.52 to 0.76. Dothistroma was positively associated with Genolevuria and Alternaria but negatively associated with Lophodermium and Phacidium, two prominent needle-associated fungi. Such patterns may reflect shared environmental preferences, differences in ecological niches or indirect competition, but correlations alone cannot establish direct biological interactions. The network was driven chiefly by the pathogen-rich reference group, whereas Dothistroma was a minor component of the community at Vernár.</p>
<p>The findings fit a broader picture in which northeastern Europe and western Asia are considered the pathogen’s likely center of origin, overlapping the native range of Scots pine. Earlier genetic work found high diversity and a low clonal fraction in Slovak populations, conditions consistent with a long association between pathogen and host. The Vernár stand, however, was close to a busy road and settlement, contained Austrian pine reported to be susceptible to the disease, and lay outside a designated nature conservation zone. These characteristics could facilitate human-mediated introduction or local spread, although the study could not determine whether transport, natural dispersal or another factor was responsible.</p>
<p>Several limitations prevent the results from being read as a simple comparison between diseased and healthy forests. Natural stands were sampled in one season, whereas the reference material came from several localities and years and had been selected because it was already known to contain the pathogen. Stand type, location, collection period, pathogen status and sample history were therefore intertwined. Fallen needles also present special difficulties: fungi may colonize them after abscission, so the sequencing results describe communities associated with needle litter rather than a direct snapshot of living foliage. Larger, replicated studies using fresh needles from living and asymptomatic trees, repeated across seasons and localities, will be needed to resolve the pathogen’s true ecological footprint.</p>
<p><strong>Subject of Research:</strong> Occurrence of Dothistroma septosporum and fungal community structure in Slovak Scots pine stands</p>
<p><strong>Article Title:</strong> Fungal Needle Communities and Dothistroma septosporum Occurrence in Pinus sylvestris Stands in Slovakia</p>
<p><strong>Article References:</strong> Artimová, R., Adamčíková, K., Medo, J., Kobza, M., Ondrušková, E., &amp; Jánošíková, Z. (2026). Fungal Needle Communities and Dothistroma septosporum Occurrence in Pinus sylvestris Stands in Slovakia. <em>Ecology and Evolution, 16</em>(10), Article e74481. <a href="https://doi.org/10.1002/ece3.74481" rel="noopener noreferrer">https://doi.org/10.1002/ece3.74481</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> <a href="https://doi.org/10.1002/ece3.74481" rel="noopener noreferrer">10.1002/ece3.74481</a></p>
<p><strong>Keywords:</strong> Dothistroma septosporum, Scots pine, pine needle blight, fungal communities, ITS metabarcoding, quantitative PCR, mycobiome, Slovakia, forest pathology, co-occurrence networks, Fungal, Needle</p>
]]></content:encoded>
					
		
		
		<post-id xmlns="com-wordpress:feed-additions:1">315439</post-id>	</item>
		<item>
		<title>Gut Fungus Found Lurking in Prostate Tumors Speeds Cancer Growth in Mice</title>
		<link>https://scienmag.com/gut-fungus-found-lurking-in-prostate-tumors-speeds-cancer-growth-in-mice/</link>
		
		<dc:creator><![CDATA[Nathaniel Bowman]]></dc:creator>
		<pubDate>Sat, 12 Sep 2026 15:00:50 +0000</pubDate>
				<category><![CDATA[Cancer]]></category>
		<category><![CDATA[androgen deprivation]]></category>
		<category><![CDATA[cancer progression]]></category>
		<category><![CDATA[castration-resistant prostate cancer]]></category>
		<category><![CDATA[Commensal]]></category>
		<category><![CDATA[commensal fungi]]></category>
		<category><![CDATA[emerging research on tumor-associated fungi]]></category>
		<category><![CDATA[fungal contributions to cancer therapy resistance]]></category>
		<category><![CDATA[fungal translocation]]></category>
		<category><![CDATA[fungi as active participants in tumor development]]></category>
		<category><![CDATA[fungi in tumor microenvironment]]></category>
		<category><![CDATA[impact of commensal yeast on cancer growth]]></category>
		<category><![CDATA[influence of gut fungi on tumor progression]]></category>
		<category><![CDATA[microbiome and cancer biology]]></category>
		<category><![CDATA[microbiome-based cancer research]]></category>
		<category><![CDATA[mycobiome]]></category>
		<category><![CDATA[Nakaseomyces glabratus]]></category>
		<category><![CDATA[Nakaseomyces glabratus and prostate tumors]]></category>
		<category><![CDATA[Nature Cancer]]></category>
		<category><![CDATA[prostate cancer]]></category>
		<category><![CDATA[Prostate cancer microbiome]]></category>
		<category><![CDATA[role of gut fungi in cancer progression]]></category>
		<category><![CDATA[tumor microbiome]]></category>
		<category><![CDATA[tumor microenvironment]]></category>
		<guid isPermaLink="false">https://scienmag.com/?p=195627</guid>

					<description><![CDATA[New research in Nature Cancer shows that the common commensal fungus Nakaseomyces glabratus is enriched in the feces and tumors of patients with castration-resistant prostate cancer and accelerates cancer progression in castrated, tumor-bearing mice.]]></description>
										<content:encoded><![CDATA[<p>A fungus long considered a quiet, harmless resident of the human body may play a far more sinister role in one of the most difficult cancers to treat. New research published in Nature Cancer reports that Nakaseomyces glabratus, a commensal yeast closely related to Candida, is enriched in both fecal and tumor samples from patients with castration-resistant prostate cancer, the lethal stage of the disease that no longer responds to hormone deprivation therapy. Strikingly, when the researchers administered the fungus to castrated mice bearing prostate tumors, cancer progression accelerated, suggesting that this microscopic hitchhiker is not merely a passive bystander in the tumor environment but may be an active participant in the disease&#8217;s most dangerous phase.</p>
<p>The finding lands at the intersection of two of the most rapidly evolving fields in cancer biology: the tumor microbiome and the study of fungi as overlooked members of our resident microbial communities. For decades, research into the microbiome concentrated overwhelmingly on bacteria, and rightly so, given their staggering abundance. But fungi, though numerically minor, possess qualities that make them uniquely capable of influencing their hosts. They have robust cell walls built from beta-glucans and other sugar polymers, they can switch between morphological forms, and they are armed with molecules that interact directly with the innate immune system. In recent years, fungal DNA and even intact fungal cells have been detected inside tumors ranging from pancreatic cancer to melanoma, prompting an urgent question: are these organisms contaminants, opportunists exploiting a weakened tissue, or drivers of malignant progression?</p>
<p>The new study, led by Lai and colleagues, adds substantial weight to the third possibility, at least in the context of advanced prostate cancer. By analyzing fecal samples and tumor tissue from patients with castration-resistant prostate cancer, the team found that Nakaseomyces glabratus was enriched in both compartments relative to comparisons, indicating that the fungus is not only more abundant in the gut of these patients but also physically present within the tumor microenvironment itself. That dual enrichment is important. A microbe found solely in stool could simply reflect a systemic shift in body ecology; a microbe found inside the tumor, in the same patients, raises the possibility of migration — that organisms originating in the intestinal lumen can translocate across epithelial barriers, travel through circulation or adjacent tissues, and colonize tumor sites.</p>
<p>Nakaseomyces glabratus, known in older literature as Candida glabrata, is no exotic pathogen. It is a genuine commensal, carried harmlessly by a large fraction of healthy people on mucosal surfaces of the gut, the genitourinary tract, and elsewhere. In immunocompromised individuals, however, it can become an opportunistic pathogen and is a recognized cause of invasive candidiasis in hospital settings. Its evolutionary kinship with Candida albicans makes the new findings particularly thought-provoking, because C. albicans has already been implicated in other contexts in which commensal fungi appear to reshape host physiology, from inflammatory bowel disease to oral carcinogenesis. The new work extends this emerging paradigm to the prostate, an organ whose tumor microenvironment had not previously been considered a destination for migrating fungi.</p>
<p>The castrated mouse experiments provide the study&#8217;s most consequential evidence. Prostate cancers typically depend on androgen receptor signaling, which is why androgen deprivation therapy — surgical or chemical castration — is a mainstay of treatment for advanced disease. Over time, however, tumors adapt and progress despite near-castrate hormone levels, becoming the castration-resistant form that accounts for most prostate cancer deaths. When the researchers gave Nakaseomyces glabratus to castrated mice bearing prostate tumors, the fungus accelerated cancer progression in this precisely defined hormonal context. In other words, the organism&#8217;s pro-tumor effect was observed under the very conditions that define the lethal, treatment-resistant stage of human disease, closely mirroring the patient population in which the fungus was found to be enriched.</p>
<p>How might a commensal yeast push a tumor toward faster growth? The authors&#8217; demonstration does not yet fully resolve the mechanism, but the broader literature offers several plausible avenues. Fungal cell wall components, including beta-glucans and mannans, are recognized by innate immune receptors such as Dectin-1 and Toll-like receptors, which can trigger inflammatory programs that tumors frequently exploit for growth, survival, and immune evasion. Chronic low-grade inflammation within the tumor microenvironment can promote angiogenesis, remodel the extracellular matrix, and suppress effective anti-tumor immunity, all of which favor progression. Fungi can also alter the local metabolic landscape, consume nutrients, and engage in cross-kingdom interactions with bacteria that themselves modulate inflammation and therapy response. Disentangling which of these pathways Nakaseomyces glabratus activates in the prostate will be a central task for follow-up research.</p>
<p>The translocation question is equally compelling. The intestinal barrier is a heavily policed boundary, and yet a growing body of work shows that microbial migration from gut to distant tissues is far more common than once believed. Bacterial species have been traced from the gut lumen into pancreatic tumors, breast tumors, and lymph nodes, sometimes with measurable functional consequences for disease course. The new study suggests fungi can join this list. If Nakaseomyces glabratus indeed migrates from the gut into prostate tumors, the clinical implications are immediately apparent: the gut mycobiome becomes a potential modifiable risk factor, and strategies to reduce fungal load, alter fungal community composition, or block fungal recognition pathways could, in principle, slow disease progression in affected patients.</p>
<p>Caution is, as always in this field, warranted. Enrichment and acceleration in mice establish association and a causal effect in an animal model, but they do not by themselves prove that the fungus drives progression in every patient, nor that eradicating it would improve outcomes in humans. Tumor-associated microbes can be difficult to distinguish from contaminants, and the field has grappled with reproducibility concerns surrounding low-biomass microbiome sequencing. Moreover, host factors — immune status, diet, prior antifungal or antibiotic exposure, and disease stage — likely shape whether a commensal yeast remains benign or becomes pro-tumorigenic. The most rigorous next steps will include longitudinal studies tracking fungal burden as disease progresses, mechanistic dissection of the immune signaling involved, and intervention experiments in models that test whether reducing the fungus reverses the accelerated growth.</p>
<p>Nevertheless, the conceptual shift is hard to overstate. Prostate cancer research has concentrated on hormones, genetics, and immune checkpoints; the possibility that a common commensal fungus physically resides inside prostate tumors and shapes their trajectory adds an entirely new layer to the disease model. It also resonates with an expanding appreciation that the human body is a multi-kingdom ecosystem, in which fungi, bacteria, viruses, and host cells engage in a continuous negotiation whose outcome can be health or disease. If further work confirms and extends these findings, mycobiome profiling could one day sit alongside PSA testing and genomic analysis in the clinical workup of advanced prostate cancer, and antifungal or microbiome-targeted interventions could emerge as adjuncts to existing therapies.</p>
<p>For now, the study stands as a vivid reminder that the microbes we carry with us every day are not always neutral companions. A yeast that spends most of its existence quietly metabolizing in our intestines can, under the right circumstances, find its way into a tumor and help it grow faster. Understanding when, how, and in whom that happens may open one of the most unexpected new fronts in the fight against castration-resistant prostate cancer — a front that begins not in the prostate at all, but in the gut.</p>
<p><strong>Subject of Research:</strong> Enrichment of the commensal fungus Nakaseomyces glabratus in castration-resistant prostate cancer and its acceleration of tumor progression in mice</p>
<p><strong>Article Title:</strong> Commensal Nakaseomyces glabratus migrates into prostate tumors to accelerate cancer progression</p>
<p><strong>Article References:</strong> Lai, P., Liu, L., Pernigoni, N., Du, Y., Braga, D., Troiani, M., Attanasio, G., Li, Y., Song, P., Pasquini, E., Rezzonico Jost, T., Huang, X., Maddalena, M., Mosole, S., Rinaldi, A., Pecoraro, G., Pedrani, M., Valdata, A., Bancaro, N., &#8230; Alimonti, A. (2026). Commensal Nakaseomyces glabratus migrates into prostate tumors to accelerate cancer progression. <em>Nature Cancer</em>. <a href="https://doi.org/10.1038/s43018-026-01229-9" rel="noopener noreferrer">https://doi.org/10.1038/s43018-026-01229-9</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> <a href="https://doi.org/10.1038/s43018-026-01229-9" rel="noopener noreferrer">10.1038/s43018-026-01229-9</a></p>
<p><strong>Keywords:</strong> Nakaseomyces glabratus, prostate cancer, castration-resistant prostate cancer, tumor microbiome, mycobiome, fungal translocation, commensal fungi, tumor microenvironment, androgen deprivation, cancer progression, Nature Cancer, Commensal</p>
]]></content:encoded>
					
		
		
		<post-id xmlns="com-wordpress:feed-additions:1">195627</post-id>	</item>
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