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	<title>motif &#8211; Science</title>
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	<title>motif &#8211; Science</title>
	<link>https://scienmag.com</link>
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		<title>A true bug rewrites the telomere rulebook with a rare DNA motif</title>
		<link>https://scienmag.com/a-true-bug-rewrites-the-telomere-rulebook-with-a-rare-dna-motif/</link>
		
		<dc:creator><![CDATA[Gavin Prescott]]></dc:creator>
		<pubDate>Sat, 17 Oct 2026 08:54:16 +0000</pubDate>
				<category><![CDATA[Biology]]></category>
		<category><![CDATA[Science News]]></category>
		<category><![CDATA[chromosome protection mechanisms in insects]]></category>
		<category><![CDATA[chromosome stability and maintenance]]></category>
		<category><![CDATA[comparative cytogenetics of insect telomeres]]></category>
		<category><![CDATA[dispar]]></category>
		<category><![CDATA[diversity of telomere sequences]]></category>
		<category><![CDATA[DNA sequence variation in telomeres]]></category>
		<category><![CDATA[Geocoridae]]></category>
		<category><![CDATA[Geocoris]]></category>
		<category><![CDATA[Heteroptera]]></category>
		<category><![CDATA[impact on insect evolutionary studies]]></category>
		<category><![CDATA[implications of non-canonical telomeres]]></category>
		<category><![CDATA[insect chromosome biology]]></category>
		<category><![CDATA[motif]]></category>
		<category><![CDATA[Non-canonical]]></category>
		<category><![CDATA[Scientific Research]]></category>
		<category><![CDATA[species]]></category>
		<category><![CDATA[telomere evolution in insects]]></category>
		<category><![CDATA[telomere research in true bugs]]></category>
		<category><![CDATA[telomere structure in Geocoris dispar]]></category>
		<category><![CDATA[telomeric]]></category>
		<category><![CDATA[true]]></category>
		<category><![CDATA[TTAGGGGTGG]]></category>
		<category><![CDATA[unique DNA motifs in chromosome end-caps]]></category>
		<category><![CDATA[Waga]]></category>
		<guid isPermaLink="false">https://scienmag.com/?p=296086</guid>

					<description><![CDATA[Fluorescence in situ hybridization reveals that the big-eyed bug Geocoris dispar carries the rare ten-letter telomeric motif TTAGGGGTGG, the first such finding in the family Geocoridae and the superfamily Lygaeoidea, shedding new light on telomere evolution in true bugs.]]></description>
										<content:encoded><![CDATA[<p>Deep inside the chromosomes of a small, predatory true bug, scientists have found a sequence of DNA that should not be there — at least not according to the standard textbook version of insect evolution. The big-eyed bug Geocoris dispar, a member of the family Geocoridae, carries telomeres built from a ten-letter motif spelled TTAGGGGTGG, a sequence that had never before been detected in its entire superfamily, Lygaeoidea. The discovery, published in the journal Comparative Cytogenetics, marks the first time anyone has peered into the telomere structure of Geocoridae, and it adds a surprising new branch to the map of how insects maintain the ends of their chromosomes.</p>
<p>Telomeres are the protective caps at the ends of chromosomes, and in most insects they are built from a simple five-letter repeat known as TTAGG, the so-called insect or arthropod-type motif. This sequence is considered the ancestral telomeric motif for insects and arthropods in general, having been documented across a vast range of species. Yet evolution has proven remarkably flexible when it comes to these chromosome end-caps. Throughout insect history, the canonical TTAGG motif has been repeatedly swapped out for other short motifs, long nucleotide repeats ranging from 173 to 381 base pairs, or even telomere-associated transposable elements. The result is a patchwork of telomere architectures scattered across the insect tree of life, some of which scientists are only now beginning to map with modern genomic tools.</p>
<p>True bugs, the suborder Heteroptera within the order Hemiptera, are a species-rich group with tens of thousands of described species. Despite this diversity, telomeric sequences have been characterized in only about 40 species — no more than 0.1 percent of all described true bugs — from 30 genera and 13 families, using fluorescence in situ hybridization (FISH) and chromosome-level genome assembly analysis. What has emerged from this limited sampling is a striking pattern of heterogeneity. The canonical TTAGG motif appears only in the Nepomorpha, an early branch of the true bug tree, and in the Reduviidae, the sister lineage to the other families of the infraorder Cimicomorpha. In contrast, every other examined species of Cimicomorpha and all species of the sister infraorder Pentatomomorpha carry ten-letter motifs instead: TTAGGGATGG, TTAGGGGTGG, or TTAGGGTGGT.</p>
<p>Of these three ten-letter motifs, TTAGGGATGG is by far the most prevalent, appearing in both Cimicomorpha and Pentatomomorpha and considered a candidate ancestral motif for the clade Terheteroptera, which unites these two infraorders. The other two motifs have been found exclusively in Pentatomomorpha. TTAGGGGTGG had previously been documented in the families Pentatomidae, Coreidae and Alydidae, always alongside the more common TTAGGGATGG. TTAGGGTGGT, meanwhile, was known from only a single species, the acanthosomatid bug Acanthosoma haemorrhoidale. The picture was intriguing but incomplete, with entire families of Pentatomomorpha remaining unexamined.</p>
<p>Geocoris dispar belongs to one of those unexamined families. The Geocoridae, commonly known as big-eyed bugs, are a worldwide family comprising five subfamilies, 37 genera and 321 species, classified within the superfamily Lygaeoidea in the infraorder Pentatomomorpha. More than three-quarters of Geocoridae species belong to the subfamily Geocorinae, and nearly half of those — 150 species — fall within the genus Geocoris itself. When researchers attempted to identify the telomeric motif in G. dispar using FISH with two standard probes, the canonical insect motif (TTAGG)n and the widespread ten-letter motif (TTAGGGATGG)n, both probes failed to hybridize with the chromosome ends. Something different was clearly at work.</p>
<p>To solve the puzzle, the team turned to the second most frequent telomeric sequence in Pentatomomorpha: the ten-letter motif TTAGGGGTGG. Adult males of G. dispar were collected in Voronezh Province, Russia, in August 2023, fixed in a mixture of 96 percent ethanol and glacial acetic acid, and stored at 4 degrees Celsius. Chromosome preparations were made from testes using the squash method and rendered permanent with the dry-ice technique. Standard karyotype examination employed the Schiff-Giemsa method, while the FISH procedure followed a previously published protocol. The telomeric probe was generated by PCR without a DNA template, using primers designed to amplify the (TTAGGGGTGG)n repeat, and labeled with Biotin-16-dUTP for detection.</p>
<p>The results were unambiguous. FISH with the (TTAGGGGTGG)n probe produced distinct hybridization signals at the ends of the chromosomes, confirming that G. dispar carries a ten-base-pair telomeric motif spelled TTAGGGGTGG. The karyotype itself matched earlier observations: males possess a chromosome number of 2n = 20, consisting of 18 autosomes plus XY sex chromosomes, with a pair of microchromosomes and a meioformula of n = 8AA + mm + X + Y. Fluorescence images were captured with a Leica DFC 345 FX camera on a Leica DM 6000B microscope equipped with a 100x objective lens, revealing bright signals at every chromosome terminus.</p>
<p>The significance of this finding extends well beyond a single species. Before this study, three Lygaeoidea species had been examined for telomere structure: Kleidocerys resedae and Lygaeus equestris from the family Lygaeidae, and Dimorphopterus spinolae from the family Blissidae. All three carry the motif TTAGGGATGG, the more frequent sequence in Pentatomomorpha and Cimicomorpha and the candidate ancestral motif for Terheteroptera as a whole. The discovery that G. dispar instead carries TTAGGGGTGG means this motif was previously unknown for Lygaeoidea as a whole, and it demonstrates that even within a single superfamily, telomeric sequences can differ substantially between families.</p>
<p>Pentatomomorpha is the second largest infraorder of true bugs, after Cimicomorpha, comprising over 14,000 species in approximately 40 families within six superfamilies: Aradoidea, Pentatomoidea, Coreoidea, Lygaeoidea, Pyrrhocoroidea and Idiostoloidea. In the three superfamilies for which telomere data are available — Pentatomoidea, Coreoidea and Lygaeoidea — no species has been found to carry the canonical five-letter insect-type motif. Instead, three variants of the ten-bp motif have been identified. All three appear in Pentatomoidea: TTAGGGATGG and TTAGGGGTGG in Pentatomidae, and TTAGGGTGGT in Acanthosomatidae. Two motifs, TTAGGGATGG and TTAGGGGTGG, are present in the sister superfamilies Coreoidea and Lygaeoidea. The first is found in the families Coreidae and Rhopalidae of Coreoidea, and in Lygaeidae and Blissidae of Lygaeoidea. The second appears in Coreidae and Alydidae of Coreoidea, and now in Geocoridae of Lygaeoidea.</p>
<p>Accepting the hypothesis that TTAGGGATGG is the ancestral motif for Terheteroptera, the other two ten-nucleotide motifs found in Pentatomomorpha must have emerged through the substitution of one nucleotide — in the case of TTAGGGGTGG — or two nucleotides — in the case of TTAGGGTGGT — during the evolution of this infraorder. These substitutions appear to have occurred relatively easily, producing considerable diversity of telomeric sequences across Pentatomomorpha. Notably, the TTAGGGGTGG motif seems to have arisen independently in each of the three superfamilies Pentatomoidea, Coreoidea and Lygaeoidea, a pattern of convergent evolution at the molecular level. However, the data remain limited, and the researchers emphasize that further studies are needed to fully understand how these telomeric sequences have evolved and diversified across the true bug tree of life.</p>
<p><strong>Subject of Research:</strong> Discovery of a non-canonical ten-base-pair telomeric motif TTAGGGGTGG in the true bug Geocoris dispar, the first telomere data for the family Geocoridae and the superfamily Lygaeoidea.</p>
<p><strong>Article Title:</strong> ﻿Non-canonical telomeric motif TTAGGGGTGG in the true bug species Geocoris dispar Waga, 1839 ( Heteroptera , Geocoridae )</p>
<p><strong>Article References:</strong> Golub, N., Anokhin, B., &amp; Kuznetsova, V. (2025). Non-canonical telomeric motif TTAGGGGTGG in the true bug species Geocoris dispar Waga, 1839 (Heteroptera, Geocoridae). <em>Comparative Cytogenetics, 19</em>, 117-123. <a href="https://doi.org/10.3897/compcytogen.19.156983" rel="noopener noreferrer">https://doi.org/10.3897/compcytogen.19.156983</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> <a href="https://doi.org/10.3897/compcytogen.19.156983" rel="noopener noreferrer">10.3897/compcytogen.19.156983</a></p>
<p><strong>Keywords:</strong> Non-canonical, telomeric, motif, TTAGGGGTGG, true, species, Geocoris, dispar, Waga, Heteroptera, Geocoridae, scientific research</p>
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		<post-id xmlns="com-wordpress:feed-additions:1">296086</post-id>	</item>
		<item>
		<title>Engineered Exosomes Loaded With RNA Motifs and Boosted by Rab4 Aim to Trigger Ferroptosis in Endometrial Cancer</title>
		<link>https://scienmag.com/engineered-exosomes-loaded-with-rna-motifs-and-boosted-by-rab4-aim-to-trigger-ferroptosis-in-endometrial-cancer/</link>
		
		<dc:creator><![CDATA[Nathaniel Bowman]]></dc:creator>
		<pubDate>Sat, 12 Sep 2026 19:29:40 +0000</pubDate>
				<category><![CDATA[Technology and Engineering]]></category>
		<category><![CDATA[advanced endometrial carcinoma therapeutics]]></category>
		<category><![CDATA[biocompatible nanocarriers for drug delivery]]></category>
		<category><![CDATA[cRGD targeting]]></category>
		<category><![CDATA[Drug delivery]]></category>
		<category><![CDATA[endometrial carcinoma]]></category>
		<category><![CDATA[Engineered]]></category>
		<category><![CDATA[exosome-based drug delivery]]></category>
		<category><![CDATA[exosomes]]></category>
		<category><![CDATA[ferroptosis]]></category>
		<category><![CDATA[ferroptosis induction in endometrial cancer]]></category>
		<category><![CDATA[GPX4]]></category>
		<category><![CDATA[iron-dependent cell death in cancer]]></category>
		<category><![CDATA[motif]]></category>
		<category><![CDATA[Nanomedicine]]></category>
		<category><![CDATA[overcoming tumor heterogeneity]]></category>
		<category><![CDATA[programmable exosome platforms]]></category>
		<category><![CDATA[Rab4]]></category>
		<category><![CDATA[Rab4 protein in exosome targeting]]></category>
		<category><![CDATA[RNA motifs]]></category>
		<category><![CDATA[RNA motifs in cancer therapy]]></category>
		<category><![CDATA[RNA-sorting machinery hijacking]]></category>
		<category><![CDATA[shRNA delivery]]></category>
		<category><![CDATA[systemic toxicity reduction in cancer treatment]]></category>
		<category><![CDATA[tumor-specific exosome homing]]></category>
		<guid isPermaLink="false">https://scienmag.com/?p=197904</guid>

					<description><![CDATA[Scientists have engineered exosomes that use natural RNA-sorting motifs and Rab4-boosted production to deliver ferroptosis-inducing shRNAs directly to endometrial tumors.]]></description>
										<content:encoded><![CDATA[<p>Endometrial carcinoma has quietly become one of the most formidable gynecologic malignancies in developed countries, with incidence climbing over the past decade and an increasing number of diagnoses among women under forty. While early-stage disease responds well to surgery and radiotherapy, advanced or recurrent cases remain stubbornly difficult to treat. Platinum-based chemotherapy and checkpoint inhibitors such as anti-PD-1 and anti-PD-L1 antibodies offer benefit to only a subset of patients, and they carry systemic toxicity, high cost, and limited applicability in the face of tumor heterogeneity. A new study published in Bioengineering &amp; Translational Medicine proposes an unusually elegant solution: a programmable exosome platform that hijacks the cell&#8217;s own RNA-sorting machinery, amplifies its own production line, homes in on tumor tissue, and dismantles the antioxidant defenses that endometrial cancer cells rely on to survive ferroptosis, the iron-dependent form of regulated cell death.</p>
<p>Exosomes, the tiny membrane-bound vesicles ranging from roughly 30 to 150 nanometers that cells naturally release to communicate with one another, have long been touted as ideal drug delivery vehicles. They are biocompatible, minimally immunogenic, and capable of crossing biological barriers that synthetic nanoparticles struggle with. The problem has always been cargo loading. Conventional techniques such as electroporation or passive co-incubation suffer from low encapsulation efficiency and can damage the delicate vesicle membrane, undermining function in vivo. The research team, led by investigators at Huazhong University of Science and Technology, sidestepped these issues entirely by exploiting a discovery from fundamental cell biology: mammalian cells sort specific RNAs into exosomes through sequence motifs that are recognized by RNA-binding proteins such as hnRNPA2B1. By appending these motifs to synthetic short hairpin RNAs, the researchers could coax producer cells into packaging therapeutic cargo into exosomes natively, without ever touching the vesicles with a loading device.</p>
<p>The engineering did not stop at cargo selection. A second bottleneck in exosome therapeutics is sheer quantity: parent cells rarely secrete enough vesicles for scalable manufacturing. Here the team turned to the Rab family of small GTPases, master regulators of intracellular vesicle trafficking. After systematically screening Rab family members, they found that silencing Rab4a in producer cells, specifically human umbilical vein endothelial cells used as the exosome factory, produced the largest boost in exosome output, an approximately 1.8-fold increase that outperformed silencing of Rab35 or Rab14. Mechanistically, Rab4 knockdown reduced the rapid recycling of early endosomes back to the plasma membrane, diverting membrane and cargo toward multivesicular body formation instead. Transmission electron microscopy confirmed a marked increase in multivesicular bodies and endosomal compartments, and Western blotting showed a roughly 2.6-fold rise in HGS, a core ESCRT pathway component that reflects exosome secretion capacity.</p>
<p>The resulting engineered exosomes, termed ExoM, were thoroughly characterized. Transmission electron microscopy revealed the classic cup-shaped, double-membrane morphology with diameters near 100 nanometers, and nanoparticle tracking analysis pegged the peak diameter at 107 nanometers. Positive markers of exosome identity, including TSG101, CD9, and CD63, were strongly enriched in the preparations, while the endoplasmic reticulum protein Calnexin, a negative marker, was depleted, confirming purity and correct biogenic origin. A tetracycline-inducible TetR-TetO switch gave the researchers temporal control over the expression system, allowing gene expression in the producer cells to be switched on with the small molecule trigger before exosome harvest by ultracentrifugation.</p>
<p>The cargo enrichment results were striking. The team designed four candidate RNA motifs and tested their ability to concentrate two therapeutic payloads, an shRNA targeting GPX4 and the tumor-suppressive microRNA miR-15a, inside exosomes. All four motifs outperformed unmodified controls, but the M1 motif, with the sequence CGGGAG, was the clear winner, achieving an 81.75-fold enrichment of shGPX4 and a 67.5-fold enrichment of miR-15a in secreted vesicles. Absolute quantitative PCR based on standard curves confirmed that these exosomes carried approximately 40,000 copies of each RNA per 100 million particles, concentrations the authors describe as therapeutically viable. Crucially, producer cells expressed the engineered RNAs at essentially identical levels regardless of motif, meaning the enrichment was a true sorting effect rather than a difference in transcription.</p>
<p>Rab4 silencing turned out to be a two-edged sword with both edges beneficial. The shRab4 carried within ExoM became part of the payload itself, delivered into recipient tumor cells where it began dismantling the recycling machinery. Fluorescence microscopy and flow cytometry tracked the consequences in Ishikawa endometrial cancer cells with remarkable temporal resolution. During the first four hours, engineered and control exosomes were internalized at nearly identical rates, indicating basal endocytosis was unaffected. But after roughly four to five hours, a divergence emerged: control exosome fluorescence plateaued and then declined as vesicles were recycled and expelled, while ExoM retention climbed steadily through eight hours. Rab4 protein levels in recipient cells began dropping by 12 hours and were near-completely depleted by 24 to 48 hours. The authors describe this as a priming effect, a feed-forward loop in which the first wave of exosomes disables the very recycling pathway that would otherwise eject subsequent doses.</p>
<p>To direct the platform to tumors, the researchers decorated the exosome surface with a DSPE-PEG2000-cRGD peptide that binds αvβ3 integrins, molecules overexpressed on endometrial cancer cells and tumor vasculature. The modification grew the particles from about 107 to roughly 146.5 nanometers in diameter, an increase attributed to the PEG chain and its hydration layer, but polydispersity indices remained well below 0.3 and the vesicles stayed stable for 48 hours in serum-containing medium at 37 degrees Celsius. In co-culture experiments mixing cancer cells with fluorescently labeled normal endothelial cells, cRGD-modified exosomes accumulated almost exclusively in the cancer cells, whereas unmodified vesicles distributed indiscriminately. In nude mice bearing xenograft tumors, in vivo imaging 48 hours after intravenous injection showed dramatically stronger fluorescence in tumors of animals receiving the cRGD-targeted vesicles.</p>
<p>The therapeutic payload was designed to strike at the heart of ferroptosis resistance. Prior work by the same group had established that endometrial cancer cells evade iron-dependent death by upregulating GPX4, FSP1, and ferritin heavy chain, three central antioxidants of the lipid peroxidation cascade. ExoM carries shRNAs against these targets, and treatment of Ishikawa cells measurably reduced all three at both mRNA and protein levels. The downstream biochemistry told a coherent ferroptotic story: malondialdehyde and reactive oxygen species rose, labile ferrous iron accumulated, and JC-1 staining revealed collapse of mitochondrial membrane potential. Most convincingly, co-treatment with Ferrostatin-1, a specific ferroptosis inhibitor, rescued cell viability, confirming that the cytotoxicity was genuinely ferroptosis-driven rather than a nonspecific toxic effect.</p>
<p>In vivo, the platform delivered where it mattered. Mice bearing subcutaneous Ishikawa tumors received tail-vein injections of PBS, unmodified exosomes, ExoM, a cRGD-modified exosome carrying scrambled RNA, or full cRGD-ExoM on days 3, 9, 15, and 21, and were euthanized on day 25. Tumors in the cRGD-ExoM group were significantly smaller and lighter than in all control groups, and the two partial controls, empty exosomes and scrambled-RNA vesicles, performed no better than saline, demonstrating that neither RNA machinery overload nor surface functionalization caused nonspecific harm. Tumor sections showed reduced Ki67 proliferation staining and depressed GPX4, FSP1, and FTH expression. Hematoxylin and eosin staining of lung, heart, liver, spleen, and kidney revealed no tissue damage, and serum ALT, AST, BUN, and creatinine levels remained within normal physiological ranges with no statistical differences among groups, an encouraging biosafety profile for a multi-component engineered nanomedicine.</p>
<p>The authors frame the work as a paradigm shift in which understanding intracellular trafficking directly informs therapeutic design, transforming exosomes from passive couriers into programmable nanobioreactors capable of spatially confined and temporally tunable ferroptosis induction. The platform builds on the group&#8217;s prior mechanistic studies of ferroptosis regulation in endometrial cancer, including findings on m6A modification, RAB17-mediated iron uptake control, and the circRAPGEF5-RBFOX2 axis, and it extends naturally toward combination strategies with immune checkpoint blockade or metabolic modulators, particularly in biomarker-negative tumors that respond poorly to current immunotherapy. Significant translation hurdles remain, including bioreactor-scale production, potency standardization, and pharmacokinetic tracking, but the convergence of RNA motif-guided cargo loading, Rab-controlled biomanufacturing, and integrin-targeted delivery offers a coherent roadmap for precision exosome nanomedicine in a cancer whose therapeutic options have, until now, been narrowing rather than expanding.</p>
<p><strong>Subject of Research:</strong> Engineered exosome platform for targeted ferroptosis induction in endometrial carcinoma</p>
<p><strong>Article Title:</strong> Engineered exosomes with RNA‐motif short hairpin RNA loading and Rab4‐boosted production enable controlled ferroptosis in endometrial carcinoma</p>
<p><strong>Article References:</strong> Zhang, J., Yao, Y., Shu, W., Cheng, S., Zhong, G., Yu, J., Chen, J., Dong, K., Peng, Y., Zhang, J., &amp; Wang, H. (2026). Engineered exosomes with RNA ‐motif short hairpin RNA loading and Rab4‐boosted production enable controlled ferroptosis in endometrial carcinoma. <em>Bioengineering &amp;amp; Translational Medicine</em>, Article e70163. <a href="https://doi.org/10.1002/btm2.70163" rel="noopener noreferrer">https://doi.org/10.1002/btm2.70163</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> <a href="https://doi.org/10.1002/btm2.70163" rel="noopener noreferrer">10.1002/btm2.70163</a></p>
<p><strong>Keywords:</strong> endometrial carcinoma, exosomes, ferroptosis, Rab4, RNA motifs, shRNA delivery, GPX4, cRGD targeting, nanomedicine, drug delivery, Engineered, motif</p>
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