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	<title>immune signaling pathways &#8211; Science</title>
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	<title>immune signaling pathways &#8211; Science</title>
	<link>https://scienmag.com</link>
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		<title>Mapping STING Mutations to Unlock Immunity and New Therapies</title>
		<link>https://scienmag.com/mapping-sting-mutations-to-unlock-immunity-and-new-therapies/</link>
		
		<dc:creator><![CDATA[Kristina Jarvis]]></dc:creator>
		<pubDate>Sun, 20 Sep 2026 23:08:38 +0000</pubDate>
				<category><![CDATA[Medicine]]></category>
		<category><![CDATA[antiviral immune response]]></category>
		<category><![CDATA[autoinflammatory disease]]></category>
		<category><![CDATA[cancer genomics]]></category>
		<category><![CDATA[cancer immunotherapy]]></category>
		<category><![CDATA[cGAS]]></category>
		<category><![CDATA[cGAS STING pathway]]></category>
		<category><![CDATA[cyclic dinucleotides]]></category>
		<category><![CDATA[cytosolic DNA sensing]]></category>
		<category><![CDATA[gain-of-function variants]]></category>
		<category><![CDATA[immune signaling pathways]]></category>
		<category><![CDATA[innate immune system]]></category>
		<category><![CDATA[innate immunity]]></category>
		<category><![CDATA[interferon gene activation]]></category>
		<category><![CDATA[interferon signaling]]></category>
		<category><![CDATA[loss-of-function variants]]></category>
		<category><![CDATA[molecular mechanisms of immunity]]></category>
		<category><![CDATA[SAVI]]></category>
		<category><![CDATA[STING]]></category>
		<category><![CDATA[STING agonists]]></category>
		<category><![CDATA[STING mutation mapping]]></category>
		<category><![CDATA[structural biology of immune proteins]]></category>
		<category><![CDATA[therapeutic targeting of STING]]></category>
		<category><![CDATA[TMEM173]]></category>
		<category><![CDATA[tumor immunology]]></category>
		<guid isPermaLink="false">https://scienmag.com/?p=203724</guid>

					<description><![CDATA[A comprehensive atlas of STING mutations consolidates genetic, structural, and clinical data to clarify how variants drive autoinflammation, immunodeficiency, and cancer and to guide immunotherapy development.]]></description>
										<content:encoded><![CDATA[<p>The innate immune system depends on molecular tripwires that detect when the careful compartmentalization of a healthy cell has failed. Among the most consequential of these sentinels is STING, the stimulator of interferon genes protein, an endoplasmic reticulum-resident adaptor that translates the presence of misplaced cytosolic DNA into a broad antiviral and antitumor transcriptional program. A newly published resource in Cell Research presents a systematic atlas of STING mutations, assembling into a single comparative framework the dozens of naturally occurring and experimentally characterized variants that have accumulated across human genetics, cancer genomics, and basic structural biology. By unifying these data, the atlas aims to do for STING biology what curated variant catalogs have done for other medically prominent proteins: convert scattered observations into a coherent map that connects molecular mechanism to clinical consequence.</p>
<p>The biological logic of STING makes such a map unusually valuable. Under normal conditions, STING resides in an inactive, self-inhibited conformation on the endoplasmic reticulum membrane, its ligand-binding domain held in a closed orientation. When cyclic dinucleotides, either bacterial second messengers or the mammalian cyclic GMP-AMP synthesized by the sensor cGAS after DNA leakage into the cytoplasm, bind to the ligand-binding pocket, STING rotates into an open state, exits the endoplasmic reticulum through the Golgi apparatus, and initiates a phosphorylation cascade through TBK1 and IRF3 that drives type I interferon and inflammatory cytokine production. The protein therefore operates as a conformational switch under tight negative control, and mutations that nudge the equilibrium in either direction produce distinctive disease phenotypes.</p>
<p>Gain-of-function variants of STING sit at one end of the clinical spectrum. Amino acid substitutions clustered in the dimerization interface and the lid region that covers the cyclic dinucleotide binding pocket destabilize the closed, inactive conformation, allowing spontaneous ligand-independent activation. Patients carrying such variants develop the autoinflammatory syndrome now classified as STING-associated vasculopathy with onset in infancy, or SAVI, characterized by systemic inflammation, interstitial lung disease, and vascular pathology that mirrors constitutive interferon signaling. Additional gain-of-function alleles have been linked to familial chilblain lupus and related interferonopathies, and mouse models carrying equivalent substitutions recapitulate the lethal inflammatory phenotype, confirming that the mutated protein itself, rather than an upstream sensing defect, drives pathology.</p>
<p>Loss-of-function variants occupy the opposite pole of the atlas. Biallelic inactivating mutations in the STING-encoding TMEM173 gene have been identified in patients presenting with a combined immunodeficiency marked by recurrent and severe viral infections, particularly respiratory viruses, alongside pulmonary disease. These alleles cluster in distinct structural neighborhoods: some disrupt ligand binding, others impair the conformational rearrangements needed for trafficking to the Golgi, and still others destabilize the protein so that steady-state abundance collapses. Intriguingly, a founder allele common in certain populations ablates STING function with apparently modest fitness cost, a reminder that evolutionary pressure from pathogens can shape the distribution of immune gene variants in ways that remain only partly understood.</p>
<p>Cancer adds a third interpretive layer to the mutation catalog. Tumors frequently acquire mutations that silence STING signaling, because intact STING activity, by recruiting and activating antigen-presenting cells within the tumor microenvironment, opposes immune evasion. Loss-of-function alterations of STING pathway components have been documented across a range of malignancies, including colorectal and gastric cancers, and correlate with diminished T-cell infiltration and poorer responses to immune checkpoint blockade. Conversely, pharmacological activation of STING with synthetic cyclic dinucleotide agonists has emerged as a major strategy in cancer immunotherapy, with numerous candidates advancing through preclinical and clinical evaluation. The atlas therefore serves a translational purpose: a clinician or drug developer can query whether a given tumor-associated substitution is predicted to ablate, enhance, or leave unaffected STING signaling, and can reason about how that functional assignment might inform immunotherapy selection.</p>
<p>What distinguishes a systematic atlas from a simple variant list is the integration of structural and biophysical annotation. High-resolution crystal and cryogenic electron microscopy structures of STING from human and multiple animal species have defined the ligand-binding pocket, the dimer interface, the hydrophobic lid, and the transmembrane segment, while molecular dynamics simulations have mapped the conformational transitions connecting inactive and active states. By projecting every cataloged missense mutation onto these structural ensembles, the resource makes mechanistic hypotheses explicit: substitutions can be classified by their proximity to the ligand pocket, their predicted effect on dimer stability, their likely influence on the trafficking sequence that shuttles STING from endoplasmic reticulum to Golgi, or their impact on the post-translational modification sites, including palmitoylation and phosphorylation, that modulate signaling intensity and duration.</p>
<p>The clinical translation dimension of the atlas extends beyond cancer. STING agonists are being explored as vaccine adjuvants and as treatments for chronic viral infections, where a transient burst of innate stimulation could strengthen adaptive immune responses. At the same time, excessive STING activation has been implicated in sterile inflammatory diseases, neurodegeneration, and aspects of aging biology, prompting the parallel development of STING inhibitors. An evidence-based map of how sequence variation alters STING function is directly relevant to both efforts, because it identifies which patient subgroups carry hypomorphic or hypermorphic alleles that could shift the therapeutic window. Precision dosing and patient stratification for STING-targeted drugs may ultimately depend on genotyping knowledge of exactly the kind this resource consolidates.</p>
<p>The methodological logic of atlas-building also deserves attention. Rather than relying on any single assay, the resource aggregates evidence from patient phenotypes, reporter assays measuring interferon promoter activation, protein localization studies, ligand-binding measurements, and animal models, assigning each variant a functional class supported by converging data. This convergence-based approach mitigates a chronic weakness of the field, in which individual studies using different cell lines and stimulation conditions have occasionally reported conflicting results for the same variant. By standardizing nomenclature, linking each entry to structural context, and flagging variants whose functional assignment rests on limited evidence, the atlas establishes a framework that future experimental work can extend systematically rather than idiosyncratically.</p>
<p>Several open questions frame the next phase of this effort. The functional consequences of many rare missense variants observed in large human sequencing cohorts remain untested, and the interplay between STING sequence variation and other innate immune genes, including cGAS itself and the downstream interferon receptor machinery, is only beginning to be explored. The pharmacological landscape is similarly incomplete: structural differences between human and rodent STING complicate the translation of agonists and inhibitors across species, and variants that alter drug binding pockets could produce patient-to-patient differences in treatment response. A living, continuously updated atlas offers a shared reference point for addressing these gaps, converting the accumulated knowledge of two decades of STING research into a practical instrument for genetic diagnosis, drug development, and, ultimately, the individualized treatment of the inflammatory, infectious, and malignant diseases in which this remarkable signaling protein sits at the center.</p>
<p><strong>Subject of Research:</strong> Systematic functional and structural cataloging of STING protein mutations linked to autoinflammatory disease, immunodeficiency, and cancer immunotherapy</p>
<p><strong>Article Title:</strong> Atlas-ing STING mutations to advance fundamental understanding and clinical translation</p>
<p><strong>Article References:</strong> Zhang, B.-C., &amp; Paludan, S. R. (2026). Atlas-ing STING mutations to advance fundamental understanding and clinical translation. <em>Cell Research</em>. <a href="https://doi.org/10.1038/s41422-026-01294-w" rel="noopener noreferrer">https://doi.org/10.1038/s41422-026-01294-w</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> <a href="https://doi.org/10.1038/s41422-026-01294-w" rel="noopener noreferrer">10.1038/s41422-026-01294-w</a></p>
<p><strong>Keywords:</strong> STING, innate immunity, TMEM173, SAVI, interferon signaling, cGAS, cyclic dinucleotides, loss-of-function variants, gain-of-function variants, cancer immunotherapy, STING agonists, autoinflammatory disease</p>
]]></content:encoded>
					
		
		
		<post-id xmlns="com-wordpress:feed-additions:1">203724</post-id>	</item>
		<item>
		<title>How Inflammatory Gut–Liver Crosstalk Drives Disease and Reveals New Treatment Targets</title>
		<link>https://scienmag.com/how-inflammatory-gut-liver-crosstalk-drives-disease-and-reveals-new-treatment-targets/</link>
		
		<dc:creator><![CDATA[Nathaniel Bowman]]></dc:creator>
		<pubDate>Fri, 07 Aug 2026 10:47:25 +0000</pubDate>
				<category><![CDATA[Cancer]]></category>
		<category><![CDATA[blood flow and bile circulation]]></category>
		<category><![CDATA[chronic inflammatory conditions]]></category>
		<category><![CDATA[gut-liver axis]]></category>
		<category><![CDATA[gut–liver crosstalk]]></category>
		<category><![CDATA[immune signaling pathways]]></category>
		<category><![CDATA[inflammatory disease]]></category>
		<category><![CDATA[intestinal barrier dysfunction]]></category>
		<category><![CDATA[metabolic liver disease]]></category>
		<category><![CDATA[microbial metabolites]]></category>
		<category><![CDATA[microbial product translocation]]></category>
		<category><![CDATA[potential treatment targets]]></category>
		<category><![CDATA[systemic inflammation]]></category>
		<guid isPermaLink="false">https://scienmag.com/how-inflammatory-gut-liver-crosstalk-drives-disease-and-reveals-new-treatment-targets/</guid>

					<description><![CDATA[A new review in Experimental &#38; Molecular Medicine is drawing attention to the gut–liver axis as one of the body’s most influential biological communication networks—and a potential frontier for treating chronic inflammatory disease. The article, by Akira Murao, Muhammad Aziz and Peng Wang, examines how signals moving between the intestine and liver can transform local [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>A new review in <em>Experimental &amp; Molecular Medicine</em> is drawing attention to the gut–liver axis as one of the body’s most influential biological communication networks—and a potential frontier for treating chronic inflammatory disease. The article, by Akira Murao, Muhammad Aziz and Peng Wang, examines how signals moving between the intestine and liver can transform local disturbances in the gut into systemic inflammation, metabolic dysfunction and progressive organ damage. Rather than treating the gut and liver as separate systems, the authors present them as interconnected tissues linked by blood flow, bile circulation, immune pathways and microbial metabolites.</p>
<p>The relationship begins with anatomy. Blood from much of the intestine travels directly to the liver through the portal vein, carrying nutrients, microbial products and chemical signals absorbed across the intestinal wall. Under healthy conditions, the liver acts as a biochemical filter, while the intestinal barrier limits the passage of potentially harmful substances. This barrier is maintained by mucus, epithelial cells and protein complexes known as tight junctions, which seal the spaces between neighboring cells. When inflammation, infection, dietary stress or metabolic disease weakens these defenses, bacterial components can cross into the circulation and place the liver under sustained immune pressure.</p>
<p>Among the most important signals are pathogen-associated molecular patterns, or PAMPs, such as lipopolysaccharide from the outer membrane of Gram-negative bacteria. Damage-associated molecular patterns released by injured host cells can intensify the same response. In the liver, these molecules are detected by pattern-recognition receptors, including Toll-like receptors and NOD-like receptors, on immune cells and other hepatic cell types. Activation of these sensors stimulates transcription factors such as NF-κB and promotes the production of cytokines including tumour necrosis factor, interleukin-1β and interleukin-6. A short-lived response can be protective, but persistent signalling may drive chronic inflammation and fibrosis.</p>
<p>The review also highlights the microbiome as a chemical partner in gut–liver communication. Intestinal bacteria transform dietary components into short-chain fatty acids, including acetate, propionate and butyrate, which influence epithelial integrity, immune-cell activity and energy metabolism. Other microbial products can be harmful when produced in excess or insufficiently cleared. Changes in bacterial composition, known as dysbiosis, may increase the generation of ethanol, ammonia, indole derivatives or other metabolites that affect hepatic inflammation. The biological impact depends not only on which microbes are present, but also on their activity, the integrity of the intestinal barrier and the liver’s ability to process incoming compounds.</p>
<p>Bile acids create a second major communication circuit. Produced in the liver and released into the intestine, these molecules aid fat digestion before being modified by intestinal bacteria and returned through the enterohepatic circulation. Beyond their digestive role, bile acids act as signalling molecules through receptors such as the farnesoid X receptor and the G-protein-coupled bile acid receptor TGR5. These pathways help regulate lipid and glucose metabolism, immune responses and the composition of the microbiome. Disrupted bile-acid synthesis, transport or microbial conversion can therefore affect both intestinal inflammation and liver disease, linking metabolic disorders to changes in immune signalling.</p>
<p>This network becomes particularly important in conditions such as metabolic dysfunction-associated steatotic liver disease, alcohol-associated liver disease, inflammatory bowel disease and advanced liver fibrosis. In metabolic liver disease, excess dietary energy and insulin resistance can promote fat accumulation in hepatocytes, while microbial products and inflammatory mediators amplify cellular stress. Kupffer cells, the liver’s resident macrophages, respond to these signals and communicate with stellate cells. Once activated, stellate cells produce extracellular matrix proteins, including collagen, that gradually remodel liver tissue. Persistent matrix deposition can lead to fibrosis and, in severe cases, cirrhosis.</p>
<p>The authors describe the gut–liver axis as a therapeutic opportunity, but the review also suggests why simple solutions have often failed. Antibiotics may reduce selected bacterial signals but can disrupt beneficial communities and promote resistance. Probiotics and prebiotics can influence microbial ecology, although their effects may vary according to the patient’s diet, baseline microbiome and disease stage. Approaches under investigation include targeted microbial consortia, postbiotics, faecal microbiota transplantation, engineered bacteria and dietary strategies designed to restore production of protective metabolites. The central challenge is to modify the ecosystem precisely rather than suppressing it indiscriminately.</p>
<p>Drug development is also moving toward the molecular links that connect intestinal signals with hepatic inflammation. Potential targets include receptors that detect microbial products, enzymes involved in bile-acid metabolism, inflammatory cytokine pathways and mechanisms controlling epithelial tight junctions. Therapies designed to alter bile-acid signalling or reduce fibrogenic activation in the liver could potentially interrupt disease progression. However, the review emphasizes that the gut–liver axis is highly individualized. Sex, age, genetics, medication use, diet and environmental exposures can all influence microbial communities and immune responses, making broad treatment strategies difficult to apply uniformly.</p>
<p>Future progress may depend on combining multiple forms of biological information. Metagenomic sequencing can identify microbial genes, while metabolomics reveals the compounds actually produced in the intestine and transported to the liver. Imaging, immune profiling and computational modelling may then connect these molecular signals to tissue damage and clinical outcomes. Such integrated approaches could help distinguish harmless dysbiosis from the specific microbial and metabolic patterns that predict inflammation or fibrosis. The emerging picture is not of a single disease pathway, but of a dynamic network that can be measured, manipulated and, potentially, reset.</p>
<p>By bringing together immunology, microbiology, hepatology and metabolism, Murao, Aziz and Wang position inflammatory gut–liver crosstalk as a central problem in modern medicine. The review’s message is both cautionary and promising: damage in one organ can reverberate through the entire network, but that same connectivity creates several points for intervention. Treatments that protect the intestinal barrier, rebalance microbial chemistry and calm excessive hepatic immune activation could eventually offer more precise ways to prevent chronic liver disease before irreversible scarring develops.</p>
<p><strong>Subject of Research</strong>: Inflammatory communication between the gut and liver, including the roles of the intestinal barrier, microbiome, microbial metabolites, bile acids, immune signalling and potential therapeutic targets.</p>
<p><strong>Article Title</strong>: Inflammatory gut–liver crosstalk: mechanisms and therapeutic targets</p>
<p><strong>Article References</strong>: Murao, A., Aziz, M. &amp; Wang, P. “Inflammatory gut–liver crosstalk: mechanisms and therapeutic targets.” <i>Experimental &amp; Molecular Medicine</i> (2026). <a href="https://doi.org/10.1038/s12276-026-01810-3">https://doi.org/10.1038/s12276-026-01810-3</a></p>
<p><strong>Image Credits</strong>: AI Generated</p>
<p><strong>DOI</strong>: 10.1038/s12276-026-01810-3</p>
<p><strong>Keywords</strong>: gut–liver axis, intestinal barrier, microbiome, bile acids, inflammation, liver disease, fibrosis, microbial metabolites, immune signalling, therapeutic targets</p>
]]></content:encoded>
					
		
		
		<post-id xmlns="com-wordpress:feed-additions:1">177646</post-id>	</item>
		<item>
		<title>All-Trans Retinoic Acid Suppresses Severe Fever With Thrombocytopenia Virus Inflammation in Mice</title>
		<link>https://scienmag.com/all-trans-retinoic-acid-suppresses-severe-fever-with-thrombocytopenia-virus-inflammation-in-mice/</link>
		
		<dc:creator><![CDATA[Kristina Jarvis]]></dc:creator>
		<pubDate>Mon, 27 Jul 2026 07:01:10 +0000</pubDate>
				<category><![CDATA[Biology]]></category>
		<category><![CDATA[all-trans retinoic acid]]></category>
		<category><![CDATA[cytokine suppression]]></category>
		<category><![CDATA[host-directed therapy]]></category>
		<category><![CDATA[immune signaling pathways]]></category>
		<category><![CDATA[immunomodulation]]></category>
		<category><![CDATA[inflammation regulation]]></category>
		<category><![CDATA[innate immune pathways]]></category>
		<category><![CDATA[platelet and vascular involvement]]></category>
		<category><![CDATA[Severe Fever with Thrombocytopenia Syndrome]]></category>
		<category><![CDATA[SFTS virus]]></category>
		<category><![CDATA[systemic inflammation]]></category>
		<category><![CDATA[viral infection models]]></category>
		<guid isPermaLink="false">https://scienmag.com/all-trans-retinoic-acid-suppresses-severe-fever-with-thrombocytopenia-virus-inflammation-in-mice/</guid>

					<description><![CDATA[Severe fever with thrombocytopenia syndrome (SFTS), driven by SFTS virus, can trigger life-threatening systemic inflammation, yet targeted host-directed therapies have remained limited. In new work in Nature Microbiology, researchers report that all-trans retinoic acid (ATRA), a vitamin A–derived molecule best known for regulating immune differentiation, markedly dampens inflammatory cascades in a mouse model of infection. [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>Severe fever with thrombocytopenia syndrome (SFTS), driven by SFTS virus, can trigger life-threatening systemic inflammation, yet targeted host-directed therapies have remained limited. In new work in <em>Nature Microbiology</em>, researchers report that all-trans retinoic acid (ATRA), a vitamin A–derived molecule best known for regulating immune differentiation, markedly dampens inflammatory cascades in a mouse model of infection.</p>
<p>Using infected mice to mimic key aspects of SFTS disease, the team evaluated whether ATRA could reduce the overwhelming immune activation associated with viral burden. Rather than simply slowing replication, the study emphasizes a broader immunomodulatory effect: ATRA reshaped host inflammatory signaling so that systemic cytokine production was curtailed.</p>
<p>At the cellular level, the authors focus on how innate immune pathways amplify inflammation during severe infection. By interfering with pro-inflammatory transcriptional programs, ATRA reduced signals that typically escalate during viral stress. This included down-tuning pathways that recruit and activate immune effectors, thereby lowering the intensity of systemic immune responses.</p>
<p>The findings also connect ATRA to platelet- and vascular-adjacent disease features seen in SFTS. Although the study centers on inflammation, controlling downstream immune overactivity can influence the physiological deterioration that accompanies severe disease. In this context, the work supports the idea that retinoid signaling can act as a host “brake” during infection-driven dysregulation.</p>
<p>Mechanistically, the study integrates retinoid biology with antiviral immunology, highlighting that ATRA can bias immune programs toward resolution rather than escalation. Such a shift is particularly relevant when inflammation becomes self-reinforcing and harmful, even as viral replication proceeds.</p>
<p>Importantly, the research frames ATRA as a candidate for translational exploration because retinoids are already established pharmacologically. That practical angle may speed early evaluation of dosing strategies that balance immune suppression with the need to control infection.</p>
<p>Overall, the study presents ATRA as a promising host-targeted approach to suppress systemic inflammatory pathology in SFTS. By converting damaging immune activation into a more controlled response, all-trans retinoic acid may offer a new direction for managing severe viral disease where inflammation is a central driver of morbidity.</p>
<p><strong>Subject of Research</strong>: Severe fever with thrombocytopenia syndrome (SFTS) virus; systemic inflammation; host-directed immunomodulation<br />
<strong>Article Title</strong>: All-trans retinoic acid suppresses systemic inflammation induced by severe fever with thrombocytopenia syndrome virus in mice<br />
<strong>Article References</strong>: Yu, X., Wu, J., Yin, X. et al. All-trans retinoic acid suppresses systemic inflammation induced by severe fever with thrombocytopenia syndrome virus in mice. <em>Nat Microbiol</em> (2026). <a href="https://doi.org/10.1038/s41564-026-02411-6">https://doi.org/10.1038/s41564-026-02411-6</a><br />
<strong>Image Credits</strong>: AI Generated<br />
<strong>DOI</strong>: <a href="https://doi.org/10.1038/s41564-026-02411-6">https://doi.org/10.1038/s41564-026-02411-6</a></p>
]]></content:encoded>
					
		
		
		<post-id xmlns="com-wordpress:feed-additions:1">174303</post-id>	</item>
		<item>
		<title>Phosphorylation Blocks TIR Immune Signalling to Sustain Growth</title>
		<link>https://scienmag.com/phosphorylation-blocks-tir-immune-signalling-to-sustain-growth/</link>
		
		<dc:creator><![CDATA[Drew Townsend]]></dc:creator>
		<pubDate>Mon, 09 Jun 2025 14:21:48 +0000</pubDate>
				<category><![CDATA[Biology]]></category>
		<category><![CDATA[cellular homeostasis and immune defense]]></category>
		<category><![CDATA[enzymatic function modulation]]></category>
		<category><![CDATA[immune signaling pathways]]></category>
		<category><![CDATA[mechanistic insight into immune modulation]]></category>
		<category><![CDATA[molecular switch in TIR proteins]]></category>
		<category><![CDATA[NADase activity in immune response]]></category>
		<category><![CDATA[phosphorylation as regulatory mechanism]]></category>
		<category><![CDATA[plant and animal immune systems]]></category>
		<category><![CDATA[post-translational modification in signaling]]></category>
		<category><![CDATA[redox reactions in cellular metabolism]]></category>
		<category><![CDATA[serine residue in TIR domains]]></category>
		<category><![CDATA[TIR domain-containing proteins]]></category>
		<guid isPermaLink="false">https://scienmag.com/phosphorylation-blocks-tir-immune-signalling-to-sustain-growth/</guid>

					<description><![CDATA[Toll/interleukin-1 receptor (TIR) domain-containing proteins have long been recognized as critical components of immune signaling pathways across diverse organisms, orchestrating defense mechanisms that protect cells from pathogenic threats. These proteins, pivotal in both plant and animal systems, function enzymatically by cleaving nicotinamide adenine dinucleotide (NAD⁺), a ubiquitous coenzyme involved in redox reactions and cellular metabolism. [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>Toll/interleukin-1 receptor (TIR) domain-containing proteins have long been recognized as critical components of immune signaling pathways across diverse organisms, orchestrating defense mechanisms that protect cells from pathogenic threats. These proteins, pivotal in both plant and animal systems, function enzymatically by cleaving nicotinamide adenine dinucleotide (NAD⁺), a ubiquitous coenzyme involved in redox reactions and cellular metabolism. Their NADase activity not only mediates immune response activation but also influences cellular homeostasis through complex molecular signaling routes. Despite extensive study, the regulatory mechanisms controlling TIR domain activity have remained enigmatic, leaving a crucial gap in our understanding of immune signaling modulation.</p>
<p>Recent breakthrough research has elucidated a previously unappreciated regulatory layer: phosphorylation of a highly conserved serine residue proximal to the catalytic glutamate within TIR domains acts as a molecular switch that inhibits the NADase enzymatic function. This discovery provides a striking mechanistic insight that bridges regulatory pathways in both plant and animal kingdoms. Phosphorylation serves as a post-translational modification that fine-tunes protein function by modifying structural and electronic environments, thereby modulating enzymatic activities with exquisite precision. Here, researchers demonstrate that the catalytic NAD⁺-cleaving event is dependent on integrity and accessibility of this conserved serine residue, rendering it a prime target for regulatory phosphorylation.</p>
<p>In plants, TIR activation is a double-edged sword; while it is crucial for defense activation, unrestrained activity induces programmed cell death and significantly inhibits growth, particularly under environmental challenges such as osmotic stress. This stress-induced growth repression represents an evolutionary trade-off between survival and development. The present study reveals how calcium-dependent protein kinases (CPKs), which are activated under osmotic stress conditions, phosphorylate the serine residue on plant TIR domains. This phosphorylation event effectively suppresses the NADase activity, thereby preventing excessive immune activation and enabling sustained growth despite stressful environmental conditions.</p>
<p>Remarkably, this regulatory phosphorylation mechanism is conserved in animals, highlighting an evolutionary convergence in immune signaling control. The mammalian calcium/calmodulin-dependent protein kinase II delta (CAMK2D), along with TANK-binding kinase 1 (TBK1), similarly targets TIR domains within animal immune components, including the sterile alpha and TIR motif–containing protein 1 (SARM1). SARM1 is well-known for its role in promoting axon degeneration following injury, mediated by its NADase activity. Phosphorylation by CAMK2D and TBK1 inhibits this activity, thus modulating neurodegenerative processes and maintaining cellular integrity. This cross-kingdom conservation underscores the fundamental importance of phosphorylation-mediated TIR regulation.</p>
<p>At the biochemical level, the serine residue in question is spatially adjacent to the catalytic glutamate that is central to NAD⁺ cleavage. This spatial arrangement suggests a direct influence on the active site conformation or substrate accessibility. Phosphorylation introduces a negative charge that likely induces conformational changes disrupting catalytic efficiency or substrate binding. The elegant structural coupling of catalytic and regulatory sites within TIR domains provides a sophisticated mechanism whereby cells rapidly adjust immune signaling outputs in response to intracellular and extracellular cues.</p>
<p>This nuanced regulation via phosphorylation provides a fail-safe that prevents uncontrolled immune activation, which, if left unchecked, can lead to detrimental cell death or neurodegeneration. In plants, maintaining this balance is vital to optimize defense without compromising growth potential, especially under osmotic stress where resource allocation must be judiciously managed. In animals, limiting SARM1 activity through phosphorylation may represent an adaptive neuroprotective mechanism that mitigates axonal loss following injury or disease.</p>
<p>The study utilized a combination of advanced molecular biology techniques including site-directed mutagenesis to identify the indispensability of the conserved serine residue, in vitro kinase assays demonstrating direct phosphorylation by CPKs, CAMK2D, and TBK1, and in vivo functional assays across plant and animal models. These methods collectively illuminated the causative link between phosphorylation status and NADase activity, solidifying the role of this modification as a pivotal regulator of TIR domain function.</p>
<p>Furthermore, the discovery extends our comprehension of immune signaling by highlighting a unified regulatory theme conserved across kingdoms, which alters previous paradigms stating that plant and animal immune pathways are discretely controlled. This shared regulatory circuitry prompts reconsideration of evolutionary trajectories that have shaped innate immune mechanisms and suggests potential translational avenues in agriculture and medicine.</p>
<p>From an agricultural perspective, manipulating TIR phosphorylation states could be exploited to engineer crops with enhanced resilience that withstand osmotic and other abiotic stresses without the yield penalties typically associated with immune activation. Modulation of CPK activity or phosphorylation mimicry could fine-tune immune responses, preserving growth while sustaining defense. Conversely, in the context of human health, targeting TBK1 or CAMK2D-mediated phosphorylation pathways may provide novel strategies to modulate SARM1-driven neurodegeneration, with implications for traumatic nerve injury or neurodegenerative diseases.</p>
<p>This profound insight into TIR domain regulation opens new avenues for research aimed at unraveling the complete signaling networks governing phosphorylation-dependent immune modulation. Questions remain regarding the dynamics of kinase activation under varying physiological scenarios, the interplay with other post-translational modifications, and the potential involvement of phosphatases that reverse serine phosphorylation to reactivate TIR NADase functions.</p>
<p>Moreover, understanding the structural consequences of serine phosphorylation at atomic resolution through high-resolution crystallography or cryo-electron microscopy could yield detailed mechanistic models, paving the way for the rational design of small molecules that mimic or inhibit this modification. Such molecules could serve as tools or leads in agricultural biotechnology or clinical therapeutics, representing a promising frontier at the interface of basic biology and applied sciences.</p>
<p>Collectively, this study illuminates a fundamental biochemical checkpoint that governs TIR domain-mediated immune signaling, embodying a sophisticated evolutionary solution to balance defense and survival across life&#8217;s domains. The conservation of this phosphorylation-dependent inhibition underscores the universality of molecular principles underlying immunity and highlights the intricate interplay between enzymatic activity and post-translational modifications in cellular homeostasis.</p>
<p>In sum, the identification of conserved serine phosphorylation as a pivotal suppressor of TIR NADase activity transforms our understanding of immune regulation. By delineating how environmental signals, via calcium-dependent kinases, converge on TIR domains to prevent deleterious outcomes, this research offers a compelling narrative of molecular adaptation and cross-kingdom unity. It charts a path toward exploiting these insights for sustainable agriculture and neuroprotective interventions, heralding a new era of immune modulation guided by precise biochemical control.</p>
<hr />
<p><strong>Subject of Research</strong>: Regulation of Toll/interleukin-1 receptor (TIR) domain NADase activity by phosphorylation in plant and animal immune signaling.</p>
<p><strong>Article Title</strong>: TIR immune signalling is blocked by phosphorylation to maintain plant growth.</p>
<p><strong>Article References</strong>:<br />
Li, J., Chen, S., Yu, B. <em>et al.</em> TIR immune signalling is blocked by phosphorylation to maintain plant growth. <em>Nat. Plants</em> (2025). <a href="https://doi.org/10.1038/s41477-025-02012-x">https://doi.org/10.1038/s41477-025-02012-x</a></p>
<p><strong>Image Credits</strong>: AI Generated</p>
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		<title>T Cells Mobilize to Combat Gut Infections</title>
		<link>https://scienmag.com/t-cells-mobilize-to-combat-gut-infections/</link>
		
		<dc:creator><![CDATA[Kristina Jarvis]]></dc:creator>
		<pubDate>Wed, 22 Jan 2025 20:34:15 +0000</pubDate>
				<category><![CDATA[Technology and Engineering]]></category>
		<category><![CDATA[Adaptive immune response]]></category>
		<category><![CDATA[cancer immunotherapy]]></category>
		<category><![CDATA[Gut immunity]]></category>
		<category><![CDATA[Immune cell migration]]></category>
		<category><![CDATA[immune signaling pathways]]></category>
		<category><![CDATA[Microbial defense]]></category>
		<category><![CDATA[Organ-specific immunity]]></category>
		<category><![CDATA[Pathogen interception]]></category>
		<category><![CDATA[Spatial transcriptomics]]></category>
		<category><![CDATA[T cell differentiation]]></category>
		<category><![CDATA[Tissue microenvironment]]></category>
		<category><![CDATA[Tissue-resident memory T cells]]></category>
		<guid isPermaLink="false">https://scienmag.com/t-cells-mobilize-to-combat-gut-infections/</guid>

					<description><![CDATA[In the complex environment of the human gut, immune cells play a crucial role in balancing the delicate dance of nutrient absorption and pathogen defense. New research from the La Jolla Institute for Immunology (LJI), UC San Diego, and the Allen Institute for Immunology sheds light on the intriguing behaviors of tissue-resident memory CD8 T [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>In the complex environment of the human gut, immune cells play a crucial role in balancing the delicate dance of nutrient absorption and pathogen defense. New research from the La Jolla Institute for Immunology (LJI), UC San Diego, and the Allen Institute for Immunology sheds light on the intriguing behaviors of tissue-resident memory CD8 T cells (T<sub>RM</sub> cells), which are pivotal in combating infections in the small intestine. These immune warriors undergo remarkable transformations and spatial relocations, as they activate to thwart the encroaching threats posed by various pathogens.</p>
<p>Dr. Miguel Reina-Campos, an assistant professor at LJI, emphasizes the unique challenges that the gut presents to the immune system. For immune cells, this region is both a gateway for essential nutrients and a potential entry point for harmful invaders. The intricate structures within the small intestine, such as the villi and crypts, serve as a landscape where the battle between the immune system and infections unfolds. </p>
<p>Recent findings reveal that T<sub>RM</sub> cells do not merely patrol the intestinal lining; during an infection, they rise to the surface of the tissue, enhancing their ability to intercept pathogens before they infiltrate deeper layers. This radical shift in positioning reflects the adaptive nature of the immune response and suggests that these cells are engineered to respond efficiently to local threats. The research team employed advanced spatial transcriptomics techniques to decode the behavior of T<sub>RM</sub> cells in both human and mouse tissue samples, an approach that enables scientists to observe immune responses at a previously unattainable resolution.</p>
<p>Delving deeper into the gut&#8217;s architecture reveals that T<sub>RM</sub> cells exist in at least two distinct states within the small intestine. Progenitor-like T<sub>RM</sub> cells are strategically located closer to the crypts, while their more active, differentiated counterparts are stationed on the tips of villi. This arrangement ensures a rapid response to infections, capitalizing on their elevated position where they can best defend against intruding pathogens. Notably, the progenitor-like cells serve as a reserve, ensuring the immune system has the necessary reinforcements to mount a sustained defense against infection.</p>
<p>A noteworthy aspect of this research is the discovery of chemical signals produced by the gut tissue, which serve as navigational cues for immune cells. These signals orchestrate the migration and activation of T<sub>RM</sub> cells, effectively directing them to areas of potential infection. By revealing the intricate communication pathways that dictate immune cell positioning, this research positions itself as a critical resource for future studies aiming to enhance gut immunity. </p>
<p>The implications of this study extend beyond our current understanding of immune responses. Dr. Reina-Campos suggests that insights gained from studying T<sub>RM</sub> cells could inform the development of cancer immunotherapies targeting specific organ systems. By harnessing the mechanisms that enable immune cells to localize and adapt to particular tissue environments, scientists may be able to develop more effective strategies for combating tumors in the future.</p>
<p>The utilization of spatial transcriptomics marks a significant advancement in immunological research, allowing scientists to capture the dynamics of immune memory formation in real time and within the complex spatial environment of the gut. This novel approach has the potential to unravel the synchronous interactions among immune cells and their microenvironments, analogous to the pieces of a chess match where movement and strategy dictate the outcome.</p>
<p>As researchers explore this newfound understanding, Dr. Reina-Campos draws parallels between the immune response and a strategy game. Traditionally, scientists have examined isolated immune components, akin to studying individual chess pieces without considering the intricate dynamics of the game board. The current study aims to elucidate the broader picture of immune activity, enhancing our knowledge of how cells interact during an infection and how these interactions can be manipulated for therapeutic benefit.</p>
<p>The research findings urge scientists to expand their inquiries into various organs beyond the gut. Understanding how tissue architecture influences the behaviors of immune cells could unveil revolutionary approaches for tackling diseases across different biological landscapes, including the kidneys and lungs. This comprehensive perspective could pave the way for novel treatments that leverage the natural mechanisms of immunity to combat diverse diseases, including cancer.</p>
<p>The study also acknowledges the collaborative effort that made these findings possible. The groundbreaking computational methods developed by the research team enabled them to analyze the vast amounts of data generated through spatial transcriptomics effectively and derive meaningful insights. The combination of innovative technological techniques and the profound biological questions addressed lays the groundwork for a new era of immune research.</p>
<p>As experts fine-tune their understanding of the immune system&#8217;s mechanisms, they look forward to the pivotal role that tissue-resident memory T cells will play in shaping future therapeutic strategies. With the potential to bolster immune responses within specific tissue environments, these cells symbolize a frontier of possibility, bridging fundamental immunology and the practical applications in clinical settings. Researchers are now poised to harness this knowledge to elevate the efficacy of immunotherapies, creating targeted solutions that reflect the complexity of the biological systems at play.</p>
<p>In conclusion, the research on T<sub>RM</sub> cells presents a fascinating narrative of adaptation, navigation, and defense within the immune system, reflecting the persisting need for intricate balance in our biological processes. As we further unravel the complexities of immune behavior, the dialogue around innovative therapeutic interventions in the battle against diseases continues to evolve.</p>
<p><strong>Subject of Research</strong>: Immune cell behaviors in the small intestine<br />
<strong>Article Title</strong>: Tissue-resident memory CD8 T cell diversity is spatiotemporally imprinted<br />
<strong>News Publication Date</strong>: 22-Jan-2025<br />
<strong>Web References</strong>: <a href="https://www.nature.com/articles/s41586-024-08466-x">Nature</a><br />
<strong>References</strong>: N/A<br />
<strong>Image Credits</strong>: Credit: Image from the Reina Lab, La Jolla Institute for Immunology  </p>
<h4><strong>Keywords</strong></h4>
<ul>
<li>Immune system</li>
<li>T cells </li>
<li>Pathogens</li>
<li>Small intestine </li>
<li>Spatial transcriptomics </li>
<li>Viral infections </li>
<li>Genetic technology </li>
<li>Tissue structure </li>
<li>Memory T cells </li>
<li>Effector T cells </li>
<li>Digestive system </li>
<li>Transcriptomics</li>
</ul>
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		<title>Breakthrough Research on Lethal Canine Cancer Uncovers Pathways for Enhanced Treatment</title>
		<link>https://scienmag.com/breakthrough-research-on-lethal-canine-cancer-uncovers-pathways-for-enhanced-treatment/</link>
		
		<dc:creator><![CDATA[Nathaniel Bowman]]></dc:creator>
		<pubDate>Tue, 21 Jan 2025 21:08:03 +0000</pubDate>
				<category><![CDATA[Cancer]]></category>
		<category><![CDATA[angiosarcoma treatment]]></category>
		<category><![CDATA[cancer immunotherapy]]></category>
		<category><![CDATA[canine cancer models]]></category>
		<category><![CDATA[canine hemangiosarcoma]]></category>
		<category><![CDATA[Comparative Oncology]]></category>
		<category><![CDATA[genetic mutations in cancer]]></category>
		<category><![CDATA[immune signaling pathways]]></category>
		<category><![CDATA[PIK3CA mutation]]></category>
		<category><![CDATA[Translational Medicine]]></category>
		<category><![CDATA[tumor microenvironment]]></category>
		<category><![CDATA[vascular cancer research]]></category>
		<category><![CDATA[veterinary oncology]]></category>
		<guid isPermaLink="false">https://scienmag.com/breakthrough-research-on-lethal-canine-cancer-uncovers-pathways-for-enhanced-treatment/</guid>

					<description><![CDATA[Researchers at the University of Florida College of Veterinary Medicine, in collaboration with the UF Health Cancer Center, have made groundbreaking discoveries regarding canine hemangiosarcoma, a virulent cancer that manifests in the blood vessels of dogs. This research has unveiled a significant connection between a specific gene mutation and immune signaling, which has implications not [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>Researchers at the University of Florida College of Veterinary Medicine, in collaboration with the UF Health Cancer Center, have made groundbreaking discoveries regarding canine hemangiosarcoma, a virulent cancer that manifests in the blood vessels of dogs. This research has unveiled a significant connection between a specific gene mutation and immune signaling, which has implications not only for canine health but also for human medicine, especially concerning similar vascular cancers, such as angiosarcoma. </p>
<p>Hemangiosarcoma stands out as one of the most aggressive neoplasms in canine patients, predominantly affecting older dogs, particularly golden retrievers. The insidious nature of the disease allows it to remain undetected until it reaches an advanced stage, at which point the tumors may rupture, resulting in acute medical emergencies. Alarmingly, the prognosis for affected dogs is grim, with only 10% of diagnosed canines expected to survive beyond the first year and none living past two years. This stark reality compels veterinary researchers to explore better diagnostic and therapeutic interventions.</p>
<p>The sheer prevalence of hemangiosarcoma in the canine population offers a unique advantage for oncological research. With more than 50,000 cases diagnosed annually in veterinary settings across the United States, researchers have a substantial pool of data to analyze, which bears significant potential for translating findings to human oncology. This is especially crucial for understanding human angiosarcoma, which, while similarly lethal, affects far fewer individuals—approximately 1,000 Americans each year, making clinical data collection for this rare cancer challenging.</p>
<p>Jon Kim, D.V.M., Ph.D., the lead research scientist and an assistant professor at the University of Florida, articulates the intrinsic value of studying canine cancer biology. By analyzing tumors in dogs, researchers glean invaluable insights that can apply to human cancer research paradigms. Kim&#8217;s assertion posits that the canine model acts as a natural laboratory where complex tumor interactions can be examined and understood in a manner that would be difficult to replicate in human research due to the rarity of corresponding cancers.</p>
<p>The research team’s findings, recently published in notable journals, reveal a critical mechanism by which hemangiosarcoma proliferates and propagates. Researchers discovered that this type of cancer does not merely construct its blood supply independently; rather, it co-opts surrounding healthy cells, manipulating them to facilitate its own nutrient and oxygen acquisition. This cancer&#8217;s ability to hijack normal cellular processes may provide insights into potential therapeutic targets and diagnostic markers.</p>
<p>Intriguingly, the study has highlighted a pivotal genetic mutation in the PIK3CA gene, known to be prevalent in various human cancers. This mutation has been shown to contribute to the aberrant signaling pathways that impinge upon the immune system, leading to a confused immune response. Such immune evasion is a hallmark of many cancers, allowing tumor cells to grow unchecked by the body’s defenses. Understanding this mutation&#8217;s role provides a roadmap for developing targeted treatments that might correct or inhibit these pathological processes in both canine and human subjects.</p>
<p>While there has been substantial knowledge regarding the implications of PIK3CA mutations, the intricate dynamics of how these alterations specifically govern cancer growth and treatment response remain somewhat nebulous. Kim and his colleagues aim to bridge these gaps through their research, shedding light on the molecular underpinnings that dictate the disease&#8217;s behavior and therapeutic responses. This research could foster innovative treatment strategies that harness the insights gained from canine pathology to combat similar challenges in human oncology.</p>
<p>The scarcity of angiosarcoma cases in humans has impeded the scientific community’s ability to conduct robust studies that could lead to effective treatments or understand the fundamental biology of the disease, which often inhibits the development of meaningful clinical trials. In stark contrast, the canine counterpart offers a treasure trove of clinical data and biological insights that can inform research efforts targeting both species. Researchers believe that the comparative approach might pave the way for groundbreaking advancements in treating these fatal cancers.</p>
<p>Through laboratory-based investigations, the research team found that hemangiosarcoma cells possess an uncanny ability to stimulate the production of blood cells, potentially fostering a microenvironment that promotes the development of ‘cancer-friendly’ immune cells. These cells, in turn, may facilitate the tumor&#8217;s growth while simultaneously misleading the immune system. The connection between the mutant PIK3CA gene and immune disruption opens new avenues for therapeutic interventions designed to counteract this phenomenon, leading to better patient outcomes in both dogs and humans.</p>
<p>Kim expresses optimism regarding the potential of this research to unravel the complexities associated with clinical and translational aspects of canine hemangiosarcoma and its relationship to human cancers. The ultimate aim is to leverage the wealth of knowledge gleaned from studying these tumors in dogs to develop innovative cancer treatments that may improve prognosis and quality of life for affected individuals across species.</p>
<p>The implications of such findings are profound, emphasizing the importance of canine cancer models in scientific research. By elucidating the mechanisms that underlie tumor genesis and immune system interactions, this research serves as a crucial stepping stone toward developing effective therapies that may enhance survival rates and therapeutic success for both canine and human patients battling aggressive vascular malignancies.</p>
<p>In conclusion, this research conducted by the University of Florida represents a significant leap in understanding the interplay between genetics and the immune system within the context of canine hemangiosarcoma. With the potential to impact treatment strategies not only for dogs but also for the relatively scarce human counterparts of this condition, the study underscores the vital role domestic animals play in advancing medical research and therapeutic innovation.</p>
<p><strong>Subject of Research</strong>: Canine hemangiosarcoma and its genetic link to immune system signaling<br />
<strong>Article Title</strong>: PIK3CA mutation fortifies molecular determinants for immune signaling in vascular cancers<br />
<strong>News Publication Date</strong>: 21-Dec-2024<br />
<strong>Web References</strong>: <a href="https://www.nature.com/articles/s41417-024-00867-4">Nature</a><br />
<strong>References</strong>: Available upon request<br />
<strong>Image Credits</strong>: Not applicable  </p>
<p><strong>Keywords</strong>: canine cancer research, hemangiosarcoma, PIK3CA mutation, immune system interaction, veterinary oncology, translational medicine, angiosarcoma treatment, cancer biology, comparative oncology, innovative therapies.</p>
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