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	<title>APP/PS1 transgenic mouse model &#8211; Science</title>
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	<title>APP/PS1 transgenic mouse model &#8211; Science</title>
	<link>https://scienmag.com</link>
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		<title>Whole-transcriptome analysis uncovers ceRNA networks linked to Alzheimer&#8217;s disease</title>
		<link>https://scienmag.com/whole-transcriptome-analysis-uncovers-cerna-networks-linked-to-alzheimers-disease/</link>
		
		<dc:creator><![CDATA[Cassandra Pierce]]></dc:creator>
		<pubDate>Mon, 07 Sep 2026 19:46:48 +0000</pubDate>
				<category><![CDATA[Medicine]]></category>
		<category><![CDATA[Alzheimer's disease molecular mechanisms]]></category>
		<category><![CDATA[Alzheimer's disease molecular pathways]]></category>
		<category><![CDATA[APP/PS1 transgenic mouse model]]></category>
		<category><![CDATA[ceRNA network analysis in Alzheimer's]]></category>
		<category><![CDATA[ceRNA networks in brain inflammation]]></category>
		<category><![CDATA[dark matter of the genome in neurodegeneration]]></category>
		<category><![CDATA[dark matter of the genome in neurodegenerative diseases]]></category>
		<category><![CDATA[gene regulatory networks in Alzheimer's]]></category>
		<category><![CDATA[gene regulatory networks in brain inflammation]]></category>
		<category><![CDATA[hippocampal gene expression analysis]]></category>
		<category><![CDATA[immune gene CD14 in Alzheimer's]]></category>
		<category><![CDATA[immune gene CD14 regulation in Alzheimer's]]></category>
		<category><![CDATA[neuronal death and brain inflammation mechanisms]]></category>
		<category><![CDATA[neuronal death and inflammation pathways]]></category>
		<category><![CDATA[non-coding RNAs and cognitive decline]]></category>
		<category><![CDATA[non-coding RNAs in Alzheimer's]]></category>
		<category><![CDATA[non-coding RNAs role in Alzheimer's]]></category>
		<category><![CDATA[RNA interactions in Alzheimer's disease progression]]></category>
		<category><![CDATA[RNA-based therapeutic targets for Alzheimer's]]></category>
		<category><![CDATA[RNA-based therapeutic targets for neurodegenerative diseases]]></category>
		<category><![CDATA[transcriptome profiling of Alzheimer's model mice]]></category>
		<category><![CDATA[transcriptome profiling of hippocampus]]></category>
		<category><![CDATA[whole-transcriptome sequencing in neurodegeneration]]></category>
		<guid isPermaLink="false">https://scienmag.com/whole-transcriptome-analysis-uncovers-cerna-networks-linked-to-alzheimers-disease/</guid>

					<description><![CDATA[Scientists have mapped an intricate web of competing genetic regulators in the brains of Alzheimer&#8217;s disease model mice, and in doing so, identified a single molecular pathway that, when silenced, dramatically reduces the brain inflammation and neuronal death that define the devastating condition. The study, published in BMC Neuroscience, used whole-transcriptome sequencing to simultaneously measure [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>Scientists have mapped an intricate web of competing genetic regulators in the brains of Alzheimer&#8217;s disease model mice, and in doing so, identified a single molecular pathway that, when silenced, dramatically reduces the brain inflammation and neuronal death that define the devastating condition. The study, published in BMC Neuroscience, used whole-transcriptome sequencing to simultaneously measure every major class of RNA molecules in the hippocampus of APP/PS1 transgenic mice, revealing a landscape of more than 6,000 differentially expressed RNAs and distilling from them a specific regulatory axis centered on the immune gene CD14.</p>
<p>The research addresses one of the most persistent frustrations in Alzheimer&#8217;s science: although decades of work have catalogued the plaques of amyloid-beta protein and tangles of tau that accumulate in diseased brains, the molecular mechanisms that translate these pathological hallmarks into progressive cognitive decline remain poorly understood, and effective therapies remain stubbornly absent. The team behind the new work reasoned that part of the answer might lie not in the protein-coding genes alone, but in the vast, once-dismissed &#8220;dark matter&#8221; of the genome—the non-coding RNAs that now appear to act as master conductors of gene expression.</p>
<p>At the heart of the study is a concept known as competing endogenous RNA, or ceRNA. The logic is elegantly simple. MicroRNAs, or miRNAs, are short RNA molecules that bind to messenger RNAs—the instructions from which proteins are built—and suppress their translation or mark them for destruction. But circular RNAs and long non-coding RNAs can carry binding sites for the same miRNAs. When these non-coding transcripts are abundant, they act as molecular sponges, mopping up miRNAs and thereby freeing messenger RNAs to produce their proteins. The result is a complex communication network in which thousands of transcripts indirectly regulate one another by competing for a limited pool of miRNA inhibitors. Disruptions to this network, the researchers hypothesized, could lie upstream of the catastrophic inflammation seen in Alzheimer&#8217;s brains.</p>
<p>To test this, the team performed whole-transcriptome sequencing on hippocampal tissue from APP/PS1 transgenic mice, a widely used model in which mice carry human genes for mutant amyloid precursor protein and presenilin 1, driving the formation of amyloid plaques and memory impairment that resemble the human disease. The sequencing effort was exhaustive. When the researchers compared the diseased animals to healthy controls, they found 376 differentially expressed messenger RNAs, 491 long non-coding RNAs, 5,253 circular RNAs, and 21 microRNAs whose levels had shifted significantly. The sheer scale of the circular RNA signal—more than five thousand distinct circRNA species altered in the diseased hippocampus—underscores how dynamic this class of molecules is in neurodegeneration.</p>
<p>These thousands of altered transcripts were then integrated computationally into ceRNA networks, with predictions of which molecules could plausibly bind one another based on complementary seed sequences. Functional enrichment analysis using the Gene Ontology and KEGG pathway databases revealed that the genes embedded in these networks clustered with striking consistency around pathways of programmed cell death—encompassing NF-κB inflammatory signaling and the assembly of molecular complexes known as inflammasomes. This was a crucial clue. Neuroinflammation, driven largely by activated microglial cells, the brain&#8217;s resident immune cells, is increasingly recognized not as a mere byproduct of Alzheimer&#8217;s disease but as an active driver of neuronal loss.</p>
<p>From the tangle of predicted interactions, one axis rose above the rest: circular RNA 13083, microRNA-298-5p, and the messenger RNA for CD14, a receptor well known to immunologists for its role in recognizing bacterial components and amplifying inflammatory responses. In the ceRNA framework, circRNA_13083 acts as a sponge for miR-298-5p. When the circular RNA is abundant, it sequesters the microRNA, allowing CD14 messenger RNA to be translated freely and CD14 protein levels to climb. The researchers&#8217; computational predictions placed this axis at a key regulatory node within the disease-associated network, and laboratory validation followed.</p>
<p>In vitro experiments using both microglial and neuronal models of Alzheimer&#8217;s disease confirmed that CD14 expression is elevated in the diseased state. The team then used small interfering RNAs to deliberately knock down CD14 and observed what happened when cells were exposed to aggregated amyloid-beta 1-42, the toxic peptide that accumulates in Alzheimer&#8217;s plaques. The results were striking. Silencing CD14 significantly attenuated the activation of NF-κB, a transcription factor that functions as a master switch for inflammation. It also reduced the assembly of the NLRP3 inflammasome, a multi-protein machine that, when triggered, activates caspase-1 and drives the maturation and secretion of two of the most potent pro-inflammatory signaling molecules in the brain: interleukin-1 beta and interleukin-18.</p>
<p>Quantitative real-time PCR confirmed the changes in gene expression for CD14, components of the NF-κB pathway, and markers of the NLRP3 inflammasome, while enzyme-linked immunosorbent assays quantified the drop in secreted IL-1β and IL-18 protein. But perhaps the most compelling evidence came from a series of conditioned medium transfer experiments. The researchers collected the liquid environment in which microglia had been grown—with or without CD14 silencing—and applied it to healthy HT-22 neuronal cells. Medium from amyloid-stimulated microglia with intact CD14 damaged the neurons; medium from microglia in which CD14 had been knocked down allowed significantly improved HT-22 cell survival, measured by CCK-8 viability assays. In other words, CD14 was not merely a marker of inflammation but a functional conduit through which activated microglia inflict harm on their neuronal neighbors.</p>
<p>The findings position CD14 as a potential therapeutic target in Alzheimer&#8217;s disease, an appealing proposition given that the gene sits at the intersection of several pathological processes. By promoting CD14 expression through the ceRNA mechanism, dysregulated circular RNAs like circRNA_13083 may tip the balance toward chronic microglial activation, inflammasome-driven cytokine release, and the programmed cell death of neurons. Interruption of this cascade at the CD14 node simultaneously dampens NF-κB signaling, prevents NLRP3 inflammasome assembly, reduces inflammatory cytokine output, and shields neurons from microglia-mediated toxicity. Whether the same dynamics operate in human brains, and whether CD14 can be safely modulated in patients, are questions that will require substantial further work, and the authors are careful to describe the axis as &#8220;potentially implicated&#8221; rather than definitively proven in human disease.</p>
<p>The study also carries broader methodological significance. Whole-transcriptome sequencing, by capturing messenger RNAs, long non-coding RNAs, circular RNAs, and microRNAs in a single experimental pass, allows researchers to view the cell&#8217;s regulatory circuitry as an integrated whole rather than in fragments. The extensive ceRNA networks reconstructed here—spanning thousands of circular and long non-coding RNAs interacting with dozens of microRNAs to shape the expression of hundreds of protein-coding genes—suggest that Alzheimer&#8217;s disease involves a system-wide rewiring of post-transcriptional regulation, not merely the altered expression of a handful of culprit genes. Such network-level views may help explain why single-target drug approaches have repeatedly fallen short in clinical trials for the disease.</p>
<p>All experimental procedures were approved by the institutional animal ethics committee and conducted in accordance with national guidelines for laboratory animal care and the ARRIVE recommendations. The work was supported by the National Natural Science Foundation of China and the Tianjin Science and Technology program. The team, led by corresponding author Yuan Ma and including co-first authors KeFei Duan, Fangfang Zhan, Yaodan Zhang and Xinghang Wang from institutions spanning Beijing, Fujian, Guangzhou, Henan, and Chifeng, has made the article open access, allowing researchers worldwide to mine the transcriptomic datasets and network predictions for new therapeutic hypotheses.</p>
<p>As the search for Alzheimer&#8217;s treatments continues, studies like this one highlight a shift in strategy: away from attacking plaques and tangles in isolation and toward understanding the regulatory networks that govern how brain cells respond to them. If a single immune receptor such as CD14 can be shown to sit at a critical junction in that network—connecting circular RNAs, microRNAs, inflammatory signaling, and neuronal survival—it may offer a point of intervention that is both biologically grounded and, with the rise of RNA-based therapeutics, increasingly within technological reach.</p>
<div class="scienmag-article-metadata"><strong>Subject of Research:</strong> Whole-transcriptome sequencing of the APP/PS1 mouse hippocampus to identify ceRNA regulatory networks in Alzheimer&#8217;s disease, focusing on the circRNA_13083/miR-298-5p/CD14 axis in neuroinflammation and programmed cell death.</p>
<p><strong>Article Title:</strong> Whole-transcriptome sequencing reveals Alzheimer&#8217;s disease–associated ceRNA regulatory networks and downstream pathways</p>
<p><strong>Article References:</strong> Duan, K., Zhan, F., Zhang, Y., Wang, X., Lin, G., Zhao, X., Yu, D., Duan, S., &amp; Ma, Y. (2026). Whole-transcriptome sequencing reveals Alzheimer’s disease–associated ceRNA regulatory networks and downstream pathways. <em>BMC Neuroscience</em>. <a href="https://doi.org/10.1186/s12868-026-01030-5" target="_blank" rel="noopener noreferrer">https://doi.org/10.1186/s12868-026-01030-5</a></p>
<p><strong>Image Credits:</strong> AI Generated</p>
<p><strong>DOI:</strong> <a href="https://doi.org/10.1186/s12868-026-01030-5" target="_blank" rel="noopener noreferrer">10.1186/s12868-026-01030-5</a></p>
<p><strong>Keywords:</strong> Alzheimer&#8217;s disease, whole-transcriptome sequencing, ceRNA network, circRNA_13083, miR-298-5p, CD14, NF-κB signaling, NLRP3 inflammasome, neuroinflammation, APP/PS1 mice, programmed cell death, microglial activation</p>
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		<post-id xmlns="com-wordpress:feed-additions:1">189644</post-id>	</item>
		<item>
		<title>NAC Eases Ethanol Effects in Alzheimer’s Mice</title>
		<link>https://scienmag.com/nac-eases-ethanol-effects-in-alzheimers-mice/</link>
		
		<dc:creator><![CDATA[Cassandra Pierce]]></dc:creator>
		<pubDate>Fri, 24 Oct 2025 19:15:34 +0000</pubDate>
				<category><![CDATA[Psychology & Psychiatry]]></category>
		<category><![CDATA[Alzheimer’s disease research]]></category>
		<category><![CDATA[APP/PS1 transgenic mouse model]]></category>
		<category><![CDATA[chronic ethanol exposure effects]]></category>
		<category><![CDATA[cognitive dysfunction and alcohol exposure]]></category>
		<category><![CDATA[ethanol-induced neuroinflammation]]></category>
		<category><![CDATA[genetic susceptibility to neurotoxicity]]></category>
		<category><![CDATA[glutathione replenishment in the brain]]></category>
		<category><![CDATA[N-acetylcysteine antioxidant therapy]]></category>
		<category><![CDATA[neuroprotective interventions]]></category>
		<category><![CDATA[oxidative stress in neurodegeneration]]></category>
		<category><![CDATA[reactive oxygen species in Alzheimer's]]></category>
		<category><![CDATA[therapeutic avenues for Alzheimer’s treatment]]></category>
		<guid isPermaLink="false">https://scienmag.com/nac-eases-ethanol-effects-in-alzheimers-mice/</guid>

					<description><![CDATA[In recent groundbreaking research, scientists have uncovered compelling evidence that N-acetylcysteine (NAC), a well-known antioxidant, significantly mitigates the devastating effects of ethanol-induced oxidative stress, neuroinflammation, and cognitive dysfunction in a genetically engineered mouse model of Alzheimer&#8217;s disease. This discovery not only sheds light on the intricate molecular mechanisms underpinning ethanol-related neurodegeneration but also opens new [&#8230;]]]></description>
										<content:encoded><![CDATA[<p>In recent groundbreaking research, scientists have uncovered compelling evidence that N-acetylcysteine (NAC), a well-known antioxidant, significantly mitigates the devastating effects of ethanol-induced oxidative stress, neuroinflammation, and cognitive dysfunction in a genetically engineered mouse model of Alzheimer&#8217;s disease. This discovery not only sheds light on the intricate molecular mechanisms underpinning ethanol-related neurodegeneration but also opens new therapeutic avenues for neuroprotective interventions in Alzheimer&#8217;s pathology exacerbated by alcohol exposure.</p>
<p>The study, conducted using the APP/PS1 transgenic mouse model, which harbors mutations linked to familial Alzheimer&#8217;s disease, rigorously investigated the pathological interplay between chronic ethanol exposure and the progression of neurodegenerative processes. Ethanol, widely recognized for its neurotoxic properties, triggers the excessive production of reactive oxygen species (ROS), culminating in oxidative stress and neuronal damage. The APP/PS1 mice exposed to ethanol demonstrated exacerbated cognitive deficits, heightened neuroinflammatory responses, and increased oxidative stress markers compared to control groups, underscoring the deleterious synergy between genetic susceptibility and environmental toxins.</p>
<p>This compelling intersection of genetic predisposition and ethanol-induced neurotoxicity prompted researchers to explore NAC&#8217;s therapeutic potential, given its established role as a precursor to glutathione, the cell&#8217;s principal antioxidant. NAC’s capacity to replenish glutathione stores in the brain is crucial for neutralizing ROS and restoring redox balance, thereby curtailing oxidative damage. The administration of NAC to ethanol-exposed APP/PS1 mice resulted in a marked reduction of oxidative stress biomarkers, including malondialdehyde and 4-hydroxynonenal, indicating a robust antioxidative response that shielded neuronal integrity.</p>
<p>Beyond redox modulation, NAC exhibited profound anti-inflammatory effects within the central nervous system. Neuroinflammation, marked by the activation of microglia and astrocytes and elevated proinflammatory cytokines, plays a pivotal role in the progression of neurodegenerative disorders. The study demonstrated that NAC treatment attenuated the expression of key inflammatory mediators such as TNF-α, IL-1β, and IL-6 in the cerebral cortex and hippocampus. This dual antioxidative and anti-inflammatory action positions NAC as a potent neuroprotective agent capable of counteracting ethanol-induced neuroinflammation.</p>
<p>Perhaps most strikingly, these molecular ameliorations translated into significant improvements in cognitive performance. Utilizing established behavioral paradigms such as the Morris water maze and novel object recognition tasks, researchers observed that NAC-treated APP/PS1 mice subjected to ethanol exposure exhibited enhanced spatial learning, memory retention, and recognition abilities compared to their untreated counterparts. This cognitive rescue effect underscores NAC’s ability to preserve neuronal function and synaptic integrity amidst the toxic insult of chronic ethanol.</p>
<p>The mechanistic insights gleaned from this study highlight the relevance of NAC in restoring the disrupted homeostasis caused by ethanol. Oxidative stress and neuroinflammation are interlinked pathological states that exacerbate amyloid-beta aggregation and tau phosphorylation, hallmark features of Alzheimer&#8217;s disease pathology. By mitigating these factors, NAC may impede the progression of amyloid pathology and the resultant neuronal loss, thereby preserving cognitive functions.</p>
<p>Furthermore, the use of a validated Alzheimer’s disease mouse model renders these findings highly translatable to human physiology, offering hope for clinical applications in patients who suffer from neurodegenerative diseases complicated by substance abuse. Alcohol abuse is prevalent in populations at risk for or suffering from dementia, making the elucidation of protective strategies imperative for improving patient outcomes.</p>
<p>The study also underscores the importance of early therapeutic intervention in neurodegenerative diseases. Given the progressive nature of Alzheimer&#8217;s disease, intervening at the stage where oxidative stress and inflammation begin to escalate could significantly alter the disease trajectory. NAC, owing to its favorable safety profile and blood-brain barrier permeability, emerges as a promising candidate for adjunct therapy.</p>
<p>Additionally, this research complements ongoing clinical explorations of antioxidants in neurodegenerative disease management, reinforcing the notion that targeted modulation of oxidative stress can be a viable strategy. It provides crucial preclinical data that strengthens the rationale for clinical trials assessing NAC’s efficacy in Alzheimer&#8217;s patients, especially those with a history of alcohol exposure.</p>
<p>It is worth noting that while NAC exhibits promising therapeutic effects, the study emphasizes the complexity of neurodegeneration and the multifactorial nature of cognitive decline. Therefore, NAC treatment is best envisaged as part of a comprehensive therapeutic regime that includes lifestyle modifications, pharmacological interventions targeting amyloid and tau pathology, and supportive cognitive therapies.</p>
<p>The implications of these findings extend beyond Alzheimer&#8217;s disease. Given that oxidative stress and neuroinflammation are common denominators in various neuropsychiatric and neurodegenerative disorders, NAC’s modulatory effects could have broader applications. Disorders such as Parkinson&#8217;s disease, Huntington’s disease, and multiple sclerosis might benefit from NAC-based therapeutic strategies aimed at curbing oxidative and inflammatory insults.</p>
<p>Importantly, the study also delves into the dose-dependent effects of NAC, suggesting that optimizing dosing regimens might further enhance therapeutic outcomes. Future research is warranted to delineate the optimal timing, duration, and combination with other neuroprotective agents to maximize NAC efficacy.</p>
<p>In summary, the research presented offers compelling evidence that N-acetylcysteine effectively mitigates the harsh cognitive and neurobiological effects of ethanol exposure in an Alzheimer&#8217;s disease model, primarily through its antioxidative and anti-inflammatory properties. This advancement marks a significant stride toward developing targeted interventions that address the complex pathology associated with neurodegenerative diseases compounded by lifestyle factors such as alcohol consumption. As the field of neurotherapeutics advances, NAC stands out as a beacon of hope in the quest to preserve brain health and cognitive function amidst increasing environmental challenges.</p>
<hr />
<p><strong>Subject of Research</strong>: The study investigates the neuroprotective effects of N-acetylcysteine (NAC) against ethanol-induced oxidative stress, neuroinflammation, and cognitive dysfunction in an Alzheimer&#8217;s disease mouse model.</p>
<p><strong>Article Title</strong>: N-acetylcysteine (NAC) ameliorates ethanol-induced oxidative stress, neuroinflammation, and cognitive dysfunction in APP/PS1 mouse model.</p>
<p><strong>Article References</strong>:<br />
Pan, X., Su, Z., Huang, Z. et al. N-acetylcysteine (NAC) ameliorates ethanol-induced oxidative stress, neuroinflammation, and cognitive dysfunction in APP/PS1 mouse model. <em>Transl Psychiatry</em> 15, 435 (2025). <a href="https://doi.org/10.1038/s41398-025-03496-z">https://doi.org/10.1038/s41398-025-03496-z</a></p>
<p><strong>Image Credits</strong>: AI Generated</p>
<p><strong>DOI</strong>: <a href="https://doi.org/10.1038/s41398-025-03496-z">https://doi.org/10.1038/s41398-025-03496-z</a></p>
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